Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC068135.2-201ENST00000569293 1028 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 MIR3126-201ENST00000577443 74 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC016925.2-201ENST00000605108 242 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC073308.1-201ENST00000623696 305 ntBASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBE2D4Q9Y2X8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC016716.1-201ENST00000265882 708 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 SNORA8-201ENST00000384574 139 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 RNA5SP213-201ENST00000391031 106 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AL021407.1-201ENST00000404531 386 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 MTATP6P31-201ENST00000406985 692 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 MRPL35P3-201ENST00000421557 364 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 RPL27AP8-201ENST00000424277 446 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC108667.1-201ENST00000428618 249 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 UBE2V2P4-201ENST00000447495 259 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-420P-201ENST00000458780 107 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 KATNBL1P4-201ENST00000503545 918 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC008494.2-201ENST00000514544 370 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 MIR892C-201ENST00000516410 77 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC008676.3-201ENST00000521237 435 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC008562.1-201ENST00000521763 330 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 RPS3AP4-201ENST00000555161 764 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC023043.2-201ENST00000589678 1026 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 BNIP3P25-201ENST00000596023 559 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 VN1R80P-201ENST00000597126 338 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AP000942.3-201ENST00000603702 160 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 MIR6078-201ENST00000611069 100 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 AC068722.2-201ENST00000618734 544 ntBASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
UBE2D4Q9Y2X8 MTCO1P9-201ENST00000505577 1534 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 Y_RNA.62-201ENST00000362840 99 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 SNORD26-201ENST00000384147 75 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 U8.10-201ENST00000384260 133 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 RNA5SP212-201ENST00000391223 107 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 HMGN2P39-201ENST00000398005 273 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 RPS7P9-201ENST00000414704 586 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AL592045.1-201ENST00000429867 352 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 NDUFA5P10-201ENST00000432147 357 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC092393.1-201ENST00000439625 742 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 MIR4303-201ENST00000581299 66 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 MIR4713-201ENST00000582691 75 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AP001542.2-201ENST00000593141 364 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC073413.2-201ENST00000604332 360 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC068276.1-201ENST00000605793 379 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC103810.8-201ENST00000607347 118 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AP002826.1-201ENST00000608835 315 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC097655.1-201ENST00000635075 318 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AC087821.2-201ENST00000637086 450 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 AP000776.1-201ENST00000530032 1663 ntBASIC0.81□□□□□ -2.28
UBE2D4Q9Y2X8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AL391987.6-201ENST00000305671 199 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 SNORA7.1-201ENST00000363750 139 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-173P-201ENST00000364215 104 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 RNU4-91P-201ENST00000364778 135 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AL136372.1-201ENST00000403060 228 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 RPL23AP36-201ENST00000413895 458 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AC092473.1-201ENST00000441098 221 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 RPS29P28-201ENST00000446439 141 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 BUD31P2-201ENST00000449374 300 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 SNORD97-201ENST00000459187 142 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AC022447.1-201ENST00000515358 464 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 RNA5SP445-201ENST00000515889 115 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 MIR3199-1-201ENST00000582434 88 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AC090132.2-201ENST00000615881 347 ntBASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.8□□□□□ -2.28
UBE2D4Q9Y2X8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 AL161781.1-201ENST00000354277 403 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 MIR337-201ENST00000362281 93 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 RNU6-661P-201ENST00000362409 107 ntBASIC0.79□□□□□ -2.28
UBE2D4Q9Y2X8 U3.13-201ENST00000364804 214 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms