Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC007742.2-201ENST00000618226 398 ntBASIC4.23□□□□□ -1.73
USP25Q9UHP3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
USP25Q9UHP3 MTND1P37-201ENST00000636562 264 ntBASIC4.23□□□□□ -1.73
USP25Q9UHP3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.23□□□□□ -1.73
USP25Q9UHP3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.23□□□□□ -1.73
USP25Q9UHP3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP25Q9UHP3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP25Q9UHP3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 MTND5P17-201ENST00000418405 1603 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 OR1S2-201ENST00000302592 978 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 RNU6-845P-201ENST00000362578 103 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 Y_RNA.142-201ENST00000363491 102 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 XGY1-201ENST00000381172 446 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 RNU1-13P-201ENST00000384499 162 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AL136116.1-201ENST00000403591 381 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 RNU6-1068P-201ENST00000410958 103 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 BNIP3P2-201ENST00000441221 577 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 HSFY6P-201ENST00000445573 403 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 CACYBPP2-201ENST00000453625 678 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC006539.3-201ENST00000454258 129 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 RNU7-63P-201ENST00000459054 62 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC011712.1-201ENST00000588959 234 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 GLUD1P4-201ENST00000590914 418 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC103710.2-201ENST00000609912 942 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 SDR42E1P2-201ENST00000614861 481 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 AL136313.1-201ENST00000624804 202 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC008568.2-201ENST00000623862 2313 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP25Q9UHP3 AC006020.1-201ENST00000420179 1854 ntBASIC4.22□□□□□ -1.73
USP25Q9UHP3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
USP25Q9UHP3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
USP25Q9UHP3 RPL7P26-201ENST00000333817 754 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP25Q9UHP3 MIR514A1-201ENST00000385133 98 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 SDCBPP3-201ENST00000419629 891 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 RPL31P12-201ENST00000422587 358 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 HMGB3P8-201ENST00000449709 577 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC233702.1-201ENST00000482905 502 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL049874.1-201ENST00000489560 388 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 RPL38P4-201ENST00000502376 214 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC026402.1-201ENST00000513642 170 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 RNU6-390P-201ENST00000516259 103 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL355836.1-201ENST00000555951 870 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.21□□□□□ -1.74
USP25Q9UHP3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP25Q9UHP3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP25Q9UHP3 AF117829.1-206ENST00000621883 3802 ntBASIC4.21□□□□□ -1.74
USP25Q9UHP3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP25Q9UHP3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP25Q9UHP3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP25Q9UHP3 RNU4-73P-201ENST00000363164 141 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 RNA5SP515-201ENST00000364570 118 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 Y_RNA.255-201ENST00000364581 97 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 AP000567.1-201ENST00000406413 156 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 RPS20P15-201ENST00000412792 311 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC007390.1-201ENST00000415722 356 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 SRIP2-201ENST00000428470 166 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 RPS20P5-201ENST00000434808 360 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.2□□□□□ -1.74
USP25Q9UHP3 CBWD4P-201ENST00000445695 655 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC016696.1-201ENST00000446949 318 ntBASIC4.2□□□□□ -1.74
USP25Q9UHP3 AC010631.1-201ENST00000474150 156 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms