Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 AC091304.9-201ENST00000612091 226 ntBASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPSF2Q9P2I0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 UBE2L2-201ENST00000254302 429 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 GNG5P1-201ENST00000255500 204 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 SMIM11P1-201ENST00000369586 178 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 RNY3P10-201ENST00000384764 102 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AL356057.2-201ENST00000403318 432 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC093106.2-201ENST00000428212 385 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 ARPC3P1-201ENST00000437218 533 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 HMGB3P12-201ENST00000438745 556 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AL022238.1-201ENST00000442557 355 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 CYCSP35-201ENST00000451978 304 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 RNU7-23P-201ENST00000459465 62 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 MTCO2P29-201ENST00000465212 189 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC007458.1-201ENST00000542812 373 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC006130.2-201ENST00000586202 326 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AC025594.3-201ENST00000613068 790 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AL589994.2-201ENST00000621124 579 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 FRG1KP-201ENST00000623592 341 ntBASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CPSF2Q9P2I0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CPSF2Q9P2I0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CPSF2Q9P2I0 MTND5P29-201ENST00000458676 1807 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 RPS3AP3-201ENST00000411933 242 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AL365496.1-201ENST00000426885 215 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC104651.1-201ENST00000427559 735 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 HMGB1P27-201ENST00000431429 603 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 SNRPEP9-201ENST00000436794 238 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 RPS24P13-201ENST00000442520 397 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC009296.1-201ENST00000443146 155 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 CECR9-201ENST00000453421 199 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 FABP5P15-201ENST00000453566 214 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 RNU2-10P-201ENST00000516375 211 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AP000787.2-201ENST00000604432 568 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC004805.2-201ENST00000605382 482 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AL161734.1-201ENST00000609720 557 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC073114.1-201ENST00000612027 490 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC008250.2-201ENST00000615261 205 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AL355365.1-201ENST00000616480 294 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC108479.2-201ENST00000617314 601 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 AC034229.5-201ENST00000624258 185 ntBASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.15□□□□□ -1.91
CPSF2Q9P2I0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 HSPE1P11-201ENST00000339579 310 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNU6-884P-201ENST00000363889 107 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNU6-512P-201ENST00000364438 103 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNU4-91P-201ENST00000364778 135 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNU6-817P-201ENST00000391083 104 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RPL23AP32-201ENST00000395315 459 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 MIR888-201ENST00000401186 77 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 HMGN2P35-201ENST00000412164 270 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 ISCA1P1-201ENST00000426679 387 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 CYCSP32-201ENST00000440548 321 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 MTND2P4-201ENST00000445034 1004 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 PRDX3P3-201ENST00000447765 522 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
CPSF2Q9P2I0 RNA5SP269-201ENST00000459032 137 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms