Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RMST_4.1-201ENST00000616886 107 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 MIR4275-201ENST00000636486 87 ntBASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CUEDC1Q9NWM3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
CUEDC1Q9NWM3 THAP12P5-201ENST00000405864 2275 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RNA5SP183-201ENST00000362452 119 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 SNORD116-18-201ENST00000383961 92 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.400-201ENST00000383963 111 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-658P-201ENST00000384606 106 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.623-201ENST00000411128 95 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AL590762.4-201ENST00000425885 253 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 FTH1P6-201ENST00000430768 320 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC006466.1-201ENST00000438721 289 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 TPT1P12-201ENST00000448968 492 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RPS29P22-201ENST00000472363 168 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC092754.1-201ENST00000472975 479 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RPL30P1-201ENST00000488676 339 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 H3F3AP1-201ENST00000559984 334 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 AC108738.1-201ENST00000603703 237 ntBASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.21□□□□□ -1.58
CUEDC1Q9NWM3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 SNORA7.2-201ENST00000364446 145 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RPL7AP73-201ENST00000413490 353 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AL096701.2-201ENST00000416920 238 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 CYCSP6-201ENST00000434498 302 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AL359073.1-201ENST00000448036 403 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC007395.1-201ENST00000451333 677 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC012158.1-204ENST00000483430 465 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 OR7H2P-201ENST00000513483 306 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-914P-201ENST00000516749 109 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-1073P-201ENST00000517182 106 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-840P-201ENST00000517275 65 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 BNIP3P5-201ENST00000562290 498 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC023824.2-201ENST00000566185 400 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 MIR4659A-201ENST00000580269 81 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 SALL4P2-201ENST00000423288 2910 ntBASIC5.2□□□□□ -1.58
CUEDC1Q9NWM3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms