Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR514A1-201ENST00000385133 98 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CISHQ9NSE2 AL450338.1-201ENST00000407987 512 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AL109913.1-201ENST00000421173 514 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 SFR1P2-201ENST00000421841 730 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC246680.2-201ENST00000422106 389 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC234064.1-201ENST00000436312 247 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AL049734.2-201ENST00000441066 616 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 BNIP3P2-201ENST00000441221 577 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 PIGFP3-201ENST00000441918 722 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 HMGN2P23-201ENST00000456759 269 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC008481.1-201ENST00000463278 396 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC055731.1-201ENST00000474387 401 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC068781.1-201ENST00000488231 618 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 DUXAP11-201ENST00000603858 526 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 SDR42E1P2-201ENST00000614861 481 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 MIR6130-201ENST00000619419 109 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC091953.2-201ENST00000623979 160 ntBASIC1.72□□□□□ -2.13
CISHQ9NSE2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.72□□□□□ -2.13
CISHQ9NSE2 AC011477.1-204ENST00000623416 1325 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNU6-217P-201ENST00000384164 104 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNU6-549P-201ENST00000384433 107 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AL133264.1-201ENST00000407157 562 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNU2-28P-201ENST00000410457 189 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC019178.2-201ENST00000423595 505 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 EIF4EP4-201ENST00000424916 578 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC092047.1-201ENST00000424997 240 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 Z82210.1-201ENST00000440037 231 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AL096803.2-201ENST00000450032 677 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC138853.1-201ENST00000503549 823 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC022447.1-201ENST00000515358 464 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNU6-1256P-201ENST00000516539 103 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 SNORA31.22-201ENST00000517204 135 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 SNORA31.25-201ENST00000517242 134 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC010186.2-204ENST00000537668 439 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AL161729.4-201ENST00000604650 476 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AC068944.2-201ENST00000610373 403 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 AP005901.5-201ENST00000545779 1796 ntBASIC1.71□□□□□ -2.14
CISHQ9NSE2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.71□□□□□ -2.14
CISHQ9NSE2 RNU6-741P-201ENST00000383889 107 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AL158050.1-201ENST00000416077 457 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 BX510359.4-201ENST00000423750 193 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 MICF-203ENST00000432679 129 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AL353691.1-201ENST00000451332 387 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 USP9YP10-201ENST00000454868 628 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AP1S2P1-201ENST00000457344 379 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 snoU13.23-201ENST00000458863 104 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC013828.1-201ENST00000481845 158 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC034222.1-201ENST00000494052 532 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC091860.1-201ENST00000505723 432 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC022784.5-201ENST00000522241 437 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC090502.2-201ENST00000549267 280 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CISHQ9NSE2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 DEFB122-202ENST00000569013 197 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 LARP7P2-201ENST00000575306 125 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 MIR4666A-201ENST00000580160 79 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 AP002906.1-201ENST00000603405 233 ntBASIC1.7□□□□□ -2.14
CISHQ9NSE2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.7□□□□□ -2.14
CISHQ9NSE2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CISHQ9NSE2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CISHQ9NSE2 RNA5SP125-201ENST00000364843 120 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 RNU6-657P-201ENST00000383904 107 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 RNU6-932P-201ENST00000391108 106 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 AL445183.3-201ENST00000414168 502 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.69□□□□□ -2.14
CISHQ9NSE2 MTCO3P1-205ENST00000422088 832 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 AC018630.2-202ENST00000422992 927 ntBASIC1.69□□□□□ -2.14
CISHQ9NSE2 HMGB1P9-201ENST00000429856 646 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 484.2 ms