Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MIR4644-201ENST00000579929 84 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AF038458.1-201ENST00000588406 262 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 BNIP3P25-201ENST00000596023 559 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 AL390240.1-201ENST00000612950 384 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 AL159972.1-201ENST00000625150 448 ntBASIC4.35□□□□□ -1.71
CD248Q9HCU0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD248Q9HCU0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CD248Q9HCU0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD248Q9HCU0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD248Q9HCU0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 RNA5SP307-201ENST00000362863 116 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RNU6-1252P-201ENST00000363054 104 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 SNORD113-7-201ENST00000363762 77 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 Y_RNA.378-201ENST00000365652 113 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 Y_RNA.527-201ENST00000384573 102 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RNA5SP36-201ENST00000410197 133 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC096644.2-201ENST00000429278 159 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL117339.2-201ENST00000430475 180 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RPL23AP25-201ENST00000430973 463 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 MTATP6P16-201ENST00000434543 526 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RNU7-180P-201ENST00000459240 63 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC091153.1-201ENST00000466297 402 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RPL35AP15-201ENST00000468042 339 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RPL21P129-201ENST00000491732 478 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 RPS27P27-201ENST00000498779 255 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC016065.2-201ENST00000514530 444 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC011979.2-201ENST00000527568 352 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AP000857.1-201ENST00000532151 543 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 SETP2-201ENST00000553886 926 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 RPL23AP97-201ENST00000568955 471 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 MIR4504-201ENST00000577413 92 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC053481.3-201ENST00000577881 843 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 MIR4775-201ENST00000581168 75 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC060771.1-201ENST00000582031 164 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 uc_338.34-201ENST00000617467 174 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 uc_338.11-201ENST00000619132 160 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AL162373.1-201ENST00000620433 407 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AC244100.1-202ENST00000621554 382 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
CD248Q9HCU0 TAB3P1-202ENST00000452645 1634 ntBASIC4.34□□□□□ -1.71
CD248Q9HCU0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD248Q9HCU0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CD248Q9HCU0 AP001148.1-201ENST00000624124 2359 ntBASIC4.34□□□□□ -1.72
CD248Q9HCU0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD248Q9HCU0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD248Q9HCU0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AF127577.6-201ENST00000623352 2191 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC097714.1-201ENST00000511272 1647 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNU6-1115P-201ENST00000362490 106 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNA5SP130-201ENST00000364431 114 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNU6-1040P-201ENST00000383974 107 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNU6-1029P-201ENST00000384109 107 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 Y_RNA.482-201ENST00000384377 111 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD248Q9HCU0 SSXP10-201ENST00000402595 565 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL139397.2-201ENST00000404529 772 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RNU6-954P-201ENST00000411355 107 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RPS20P14-201ENST00000412545 360 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC018865.2-201ENST00000423631 129 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 MED13P1-201ENST00000428342 171 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 SUMO1P3-201ENST00000439961 304 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RPL21P89-201ENST00000444021 467 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.33□□□□□ -1.72
CD248Q9HCU0 MTND1P9-201ENST00000453775 944 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 TRBV26-201ENST00000456572 344 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 SNRPFP3-201ENST00000457792 225 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
CD248Q9HCU0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms