Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 USP9YP12-201ENST00000450481 570 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 TAF9P2-201ENST00000454958 515 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC108059.3-201ENST00000456388 214 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC116337.2-201ENST00000477662 156 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC112191.3-201ENST00000604371 277 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC090970.3-201ENST00000612566 866 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC006111.3-201ENST00000622137 383 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AC007785.2-201ENST00000598627 1916 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
SNX25Q9H3E2 AC092104.1-201ENST00000497346 1441 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 SNORA80A-201ENST00000363922 136 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 RNU4-1-201ENST00000363925 141 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 RNY4P16-201ENST00000364768 94 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 RNY3P13-201ENST00000365542 102 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL139397.2-201ENST00000404529 772 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL354719.1-201ENST00000406535 843 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 SPA17P1-201ENST00000416656 452 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC090960.1-201ENST00000421072 306 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC092047.1-201ENST00000424997 240 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC087499.2-201ENST00000432861 149 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 MTND1P28-201ENST00000435623 950 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 BNIP3P2-201ENST00000441221 577 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AP001486.1-201ENST00000463339 476 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC096576.1-201ENST00000489014 359 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC118465.1-201ENST00000513820 1271 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC114797.1-201ENST00000514003 728 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 HPRT1P3-201ENST00000539521 576 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AMZ2P1-203ENST00000565833 850 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 HMGN1P30-201ENST00000589286 268 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 U73023.1-201ENST00000603134 700 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC103710.2-201ENST00000609912 942 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AC131902.3-201ENST00000611767 581 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL603839.4-201ENST00000624658 1005 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 MTND1P37-201ENST00000636562 264 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.02□□□□□ -1.93
SNX25Q9H3E2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SNX25Q9H3E2 AL049641.1-201ENST00000441055 1948 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 RNU6-1284P-201ENST00000363701 100 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AL590383.1-201ENST00000428602 75 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC244035.1-201ENST00000430042 390 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 PGBD4P3-201ENST00000440731 581 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AL590639.1-201ENST00000456484 337 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 RPS20P22-201ENST00000473700 357 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 Y_RNA.688-201ENST00000516565 95 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 RNU6-711P-201ENST00000517255 106 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC093012.1-202ENST00000549403 582 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.01□□□□□ -1.93
SNX25Q9H3E2 CYCSP39-201ENST00000565821 309 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 MIR3609-201ENST00000582661 80 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 ELOCP29-201ENST00000588193 334 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 Z94722.1-201ENST00000604328 474 ntBASIC3.01□□□□□ -1.93
SNX25Q9H3E2 AL137843.1-201ENST00000605078 385 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms