Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC079140.5-201ENST00000507882 310 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC008526.1-201ENST00000509149 338 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RN7SKP122-201ENST00000515923 296 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RNU1-86P-201ENST00000516108 154 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RNU1-107P-201ENST00000516617 154 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC009902.1-201ENST00000519351 183 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AP005639.2-201ENST00000527592 928 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 TRAV37-201ENST00000553906 342 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC138761.3-201ENST00000579993 334 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC245389.1-201ENST00000605141 529 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC004805.2-201ENST00000605382 482 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 MIR4727-201ENST00000622232 55 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC090574.1-201ENST00000623186 233 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM55Q9BYV6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM55Q9BYV6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.46□□□□□ -1.69
TRIM55Q9BYV6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM55Q9BYV6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 RNA5SP447-201ENST00000363749 119 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 SNORD116-11-201ENST00000383882 92 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 Y_RNA.387-201ENST00000383918 102 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 ELOCP19-201ENST00000411919 318 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AL451050.1-201ENST00000450126 415 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC107399.1-201ENST00000451226 265 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 Y_RNA.632-201ENST00000459189 102 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 SCARNA10-201ENST00000459255 330 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC139453.3-201ENST00000493276 369 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 HMGB3P15-201ENST00000507326 574 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 RNU6-1332P-201ENST00000516666 104 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AL110118.1-201ENST00000553543 400 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC044792.1-201ENST00000593294 196 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AL353621.2-201ENST00000605340 133 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 RMST_4.1-201ENST00000616886 107 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 ZNF519P1-201ENST00000449011 1626 ntBASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM55Q9BYV6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RNA5SP307-201ENST00000362863 116 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RNA5SP513-201ENST00000364648 118 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 Z98745.1-201ENST00000402553 494 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RNU4-25P-201ENST00000410569 230 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RNU2-68P-201ENST00000410878 191 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RAC1P3-201ENST00000416129 580 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AL139396.1-201ENST00000421137 167 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 SNRPEP9-201ENST00000436794 238 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 Y_RNA.635-201ENST00000459041 101 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC104472.2-201ENST00000469035 601 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 MTND5P5-201ENST00000503764 376 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 HMGN1P13-201ENST00000505795 138 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RPL39P5-202ENST00000512505 151 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 FTH1P9-201ENST00000513251 355 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RN7SKP13-201ENST00000515933 244 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC087854.1-201ENST00000519706 414 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC025755.1-201ENST00000521306 278 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 CBX3P7-201ENST00000532876 502 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 ZNF192P1-203ENST00000565888 810 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 APOOP1-201ENST00000604695 592 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AL356218.2-201ENST00000605264 187 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC016727.1-205ENST00000605437 569 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TRIM55Q9BYV6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms