Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORD3J-201ENST00000408473 190 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR1269A-201ENST00000408636 105 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-705P-201ENST00000410601 104 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SKP89-201ENST00000410774 242 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNA5SP265-201ENST00000411023 111 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC004866.1-201ENST00000411748 78 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 HSPE1P12-201ENST00000412576 301 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 SNX2P2-201ENST00000424553 323 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC019185.3-201ENST00000438805 323 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RPS29P7-201ENST00000439662 171 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 FUNDC2P4-201ENST00000441207 421 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RPS26P56-201ENST00000444468 240 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC092634.4-203ENST00000451395 448 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL109809.3-201ENST00000456875 246 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 TREML3P-201ENST00000457327 501 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC234782.3-201ENST00000461229 433 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC005908.1-201ENST00000468701 347 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL815P-201ENST00000470970 290 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC022730.1-201ENST00000473114 568 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL861P-201ENST00000473793 285 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL241P-201ENST00000482973 236 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC097263.1-201ENST00000496795 606 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNA5SP96-201ENST00000516041 107 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORA31.4-201ENST00000516049 129 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-927P-201ENST00000516199 100 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-719P-201ENST00000516671 104 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-826P-201ENST00000516827 104 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 IGLVI-68-201ENST00000519525 345 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 IGKV2-36-201ENST00000519999 223 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR5705-201ENST00000579870 89 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC090774.2-201ENST00000584708 322 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC087685.1-201ENST00000587507 141 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 OR7A18P-201ENST00000600416 277 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC136601.2-201ENST00000604356 474 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC016876.3-201ENST00000610459 426 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 5S_rRNA.20-201ENST00000612104 118 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR7110-201ENST00000612638 86 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 uc_338.9-201ENST00000617424 182 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC005790.1-201ENST00000619774 450 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PFN1P2-202ENST00000621347 397 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC132068.1-201ENST00000623805 459 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 MFSD8-227ENST00000641393 4069 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 LINC02204-201ENST00000630447 3206 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms