Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RNU6-223P-201ENST00000362830 107 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RNU4-52P-201ENST00000384209 138 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RNU6-114P-201ENST00000384704 105 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RNU6-220P-201ENST00000390919 107 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL356421.1-201ENST00000403255 413 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RNA5SP425-201ENST00000410336 112 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 MTCYBP38-201ENST00000417160 1123 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 PTP4A1P7-201ENST00000423476 514 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 MYL8P-204ENST00000431574 518 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC098826.1-201ENST00000433943 471 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 RPL35AP22-201ENST00000436855 335 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC104563.1-201ENST00000476147 376 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC079203.1-201ENST00000487972 404 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC098591.2-201ENST00000510152 315 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC026436.1-201ENST00000510537 270 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC025755.1-201ENST00000521306 278 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AP003497.1-201ENST00000528472 562 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 NACAP3-201ENST00000552100 481 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC091544.4-201ENST00000555268 342 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC027807.1-201ENST00000559921 996 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL132657.2-201ENST00000564417 358 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC007151.1-201ENST00000572774 483 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 MIR3945-201ENST00000581853 98 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 DNAJC19P3-201ENST00000594491 331 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL138478.1-201ENST00000612252 832 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 SDR42E1P2-201ENST00000614861 481 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK3BQ9BT76 AC010889.1-201ENST00000566193 2666 ntBASIC1.62□□□□□ -2.15
UPK3BQ9BT76 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 KPNA2P1-201ENST00000458289 1591 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 SNORA70B-201ENST00000384210 135 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AL590084.2-201ENST00000401481 382 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 CCNG1P1-201ENST00000406783 885 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 BPY2DP-201ENST00000422208 265 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 ZYG11AP1-201ENST00000430329 837 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 MTND5P14-201ENST00000441481 1267 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 ANKRD26P4-201ENST00000455755 950 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 RPS27P21-201ENST00000486977 252 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 RPL23AP49-201ENST00000492925 468 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC008549.1-201ENST00000512900 643 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 RNA5SP290-201ENST00000517133 127 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC005832.3-201ENST00000537929 631 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AL359212.1-201ENST00000556608 614 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AL138976.2-201ENST00000563989 694 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 MIR5571-201ENST00000577998 113 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AF038458.1-201ENST00000588406 262 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC002984.1-201ENST00000591692 448 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AL357094.1-201ENST00000603845 844 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 AC007349.4-201ENST00000608114 532 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 TUG1_2.1-201ENST00000614234 87 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 MIR3199-2-201ENST00000636243 86 ntBASIC1.61□□□□□ -2.15
UPK3BQ9BT76 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK3BQ9BT76 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 MTND4P35-201ENST00000604257 1375 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
UPK3BQ9BT76 RNA5SP289-201ENST00000362332 137 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 Y_RNA.408-201ENST00000383987 102 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 RNU6-432P-201ENST00000384196 109 ntBASIC1.6□□□□□ -2.15
UPK3BQ9BT76 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms