Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC093510.2-201ENST00000562820 896 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AC087241.4-201ENST00000612441 480 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AL445493.3-201ENST00000619568 477 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 RNU6-741P-201ENST00000383889 107 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MIR518A2-201ENST00000384966 87 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AL109755.1-201ENST00000401791 649 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 RN7SKP192-201ENST00000411291 327 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MTCO3P46-201ENST00000425787 232 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AL645568.3-201ENST00000433683 316 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 FABP5P13-201ENST00000452144 328 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC084024.2-201ENST00000503480 791 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MRPS33P3-201ENST00000513456 322 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC017037.2-201ENST00000513850 890 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AL132857.1-201ENST00000555180 708 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 EIF1AXP2-201ENST00000555940 413 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 DUXAP1-201ENST00000556632 463 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MTCYBP23-201ENST00000558717 1102 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 ATP5F1P7-201ENST00000567330 760 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 LARP7P2-201ENST00000575306 125 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC124283.4-201ENST00000581815 456 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MIR4713-201ENST00000582691 75 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.23□□□□□ -2.21
AP1S3Q96PC3 BNIP3P25-201ENST00000596023 559 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AL031274.2-201ENST00000599419 203 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 MTND5P29-201ENST00000458676 1807 ntBASIC1.23□□□□□ -2.21
AP1S3Q96PC3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RNU6-884P-201ENST00000363889 107 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RNU6-253P-201ENST00000384730 105 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 MIR1294-201ENST00000408503 142 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RPL23AP39-201ENST00000415533 405 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 Z98742.3-201ENST00000418637 326 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 ZNF863P-201ENST00000426746 417 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 PSMA6P3-201ENST00000428242 164 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC005345.1-201ENST00000431868 217 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 MTCO1P57-201ENST00000432182 261 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 TPTE2P1-204ENST00000435256 593 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RPL30P9-201ENST00000465586 330 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 RNA5SP165-201ENST00000517142 115 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AP003066.2-201ENST00000529375 555 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC074050.1-201ENST00000563247 211 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC106734.1-201ENST00000568646 663 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC007151.1-201ENST00000572774 483 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 MIR4435-1-201ENST00000582552 80 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AP003973.1-201ENST00000604639 691 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 TUG1_1.1-201ENST00000610654 145 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AL138478.1-201ENST00000612252 832 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC073569.3-201ENST00000619055 682 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 MTND5P30-201ENST00000452896 1731 ntBASIC1.22□□□□□ -2.21
AP1S3Q96PC3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.22□□□□□ -2.21
AP1S3Q96PC3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AL356292.1-201ENST00000283110 373 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RNU4-82P-201ENST00000362443 140 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 MIR9-3-201ENST00000385084 90 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AL079342.1-201ENST00000401460 267 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RN7SKP51-201ENST00000410781 304 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 OR51A3P-201ENST00000413596 924 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC003989.2-201ENST00000440224 169 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 FAM103A2P-201ENST00000444122 354 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RPL7P36-201ENST00000444633 681 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AL929288.2-201ENST00000446368 407 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RPL12P25-201ENST00000455592 494 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RPS29P11-201ENST00000496507 171 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC114801.2-201ENST00000503825 781 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC069306.1-201ENST00000507006 843 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC109471.1-201ENST00000511631 612 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 RNA5SP182-201ENST00000516064 82 ntBASIC1.21□□□□□ -2.22
AP1S3Q96PC3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms