Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 AC068647.2-201ENST00000637380 353 ntBASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MS4A4AQ96JQ5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AC005725.1-201ENST00000577346 2607 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AL034549.2-201ENST00000618285 3373 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 U3.3-201ENST00000362986 216 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 RN7SKP113-201ENST00000363891 295 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 Y_RNA.293-201ENST00000364908 93 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 Y_RNA.329-201ENST00000365209 107 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 RNA5SP475-201ENST00000410568 110 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 RNA5SP31-201ENST00000411144 127 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AL138785.1-201ENST00000425821 331 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 MLLT10P2-201ENST00000506434 249 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-1007P-201ENST00000516586 107 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AC136628.3-201ENST00000521868 290 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 MIR4737-201ENST00000583979 81 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AL391903.3-201ENST00000612158 163 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AL591926.8-201ENST00000616876 211 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AL450326.2-201ENST00000421913 1962 ntBASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MS4A4AQ96JQ5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 Y_RNA.287-201ENST00000364853 94 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 MIR105-1-201ENST00000385222 81 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AL512633.1-201ENST00000399931 655 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AL160275.2-201ENST00000412010 394 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 RPL21P66-201ENST00000426566 466 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 RPL12P39-201ENST00000455456 496 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AC092754.1-201ENST00000472975 479 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 Y_RNA.757-201ENST00000578934 114 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AP000769.2-201ENST00000602344 396 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AL391261.4-201ENST00000616012 481 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 MIR3674-201ENST00000636576 68 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 MIR3914-2-201ENST00000637339 95 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 AC134026.1-201ENST00000623249 2239 ntBASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
MS4A4AQ96JQ5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 RNA5SP455-201ENST00000365190 119 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-407P-201ENST00000365280 104 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 Y_RNA.369-201ENST00000365568 117 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 RNU6-793P-201ENST00000384233 104 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 MIR487A-201ENST00000385009 80 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 RPS26P42-201ENST00000413485 326 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 AC063976.4-201ENST00000421971 163 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 AL590383.1-201ENST00000428602 75 ntBASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A4AQ96JQ5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms