Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 RNU6-217P-201ENST00000384164 104 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 SNORA26.8-201ENST00000391306 124 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 NDUFS5P1-201ENST00000405668 289 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 RNA5SP274-201ENST00000410484 108 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC006366.1-201ENST00000422002 759 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC019097.1-201ENST00000424783 735 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 ZNF863P-201ENST00000426746 417 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC010153.1-201ENST00000432862 727 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 FABP5P5-201ENST00000515537 406 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC022878.1-201ENST00000530684 149 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AC008088.1-201ENST00000580993 280 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 RNU6-87P-201ENST00000607561 108 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AL162274.2-201ENST00000614406 332 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 AL161629.2-201ENST00000615347 275 ntBASIC3.12□□□□□ -1.91
HDAC11Q96DB2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.12□□□□□ -1.91
HDAC11Q96DB2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC022336.2-201ENST00000568966 2538 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 FTLP6-201ENST00000355274 422 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNU4-21P-201ENST00000362802 126 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNU6-701P-201ENST00000384059 107 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 SNORD116-8-201ENST00000384365 95 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNU6-140P-201ENST00000384566 108 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AL021407.1-201ENST00000404531 386 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 NPM1P11-201ENST00000417106 855 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 CYCSP46-201ENST00000423569 204 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC013267.1-201ENST00000458227 267 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 MTND4LP3-201ENST00000468320 276 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RBM43P1-201ENST00000476891 1081 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC138853.1-201ENST00000503549 823 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC010486.1-201ENST00000511793 424 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNA5SP290-201ENST00000517133 127 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 ARL2BPP2-201ENST00000550907 489 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC136601.2-201ENST00000604356 474 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC121247.2-201ENST00000604776 136 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
HDAC11Q96DB2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
HDAC11Q96DB2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 RNU6-301P-201ENST00000384277 107 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 Y_RNA.598-201ENST00000410480 95 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AC129850.1-201ENST00000436203 508 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 ARPC3P1-201ENST00000437218 533 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AC093156.1-201ENST00000440382 670 ntBASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
HDAC11Q96DB2 AC116337.2-201ENST00000477662 156 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms