Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 RNU6-658P-201ENST00000384606 106 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.568-201ENST00000384742 113 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.586-201ENST00000391146 98 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 RPL19P1-201ENST00000411635 428 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC092423.1-201ENST00000430165 186 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 TPT1P12-201ENST00000448968 492 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 PLGLA-201ENST00000465668 449 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 HMGB1P21-201ENST00000502313 581 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC108471.1-201ENST00000513977 287 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC010186.2-204ENST00000537668 439 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 MIR3936-201ENST00000584304 110 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC115085.1-201ENST00000588924 229 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 THAP12P5-201ENST00000405864 2275 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC130650.2-201ENST00000618736 2403 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AC000374.1-201ENST00000434698 1745 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AC005332.5-201ENST00000591222 2919 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.273-201ENST00000364703 102 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.292-201ENST00000364904 97 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 RNU6-1130P-201ENST00000365434 107 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 RNU6-102P-201ENST00000384485 104 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AL139039.1-201ENST00000401900 692 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 TMSB10P2-201ENST00000416049 131 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 PRDX3P3-201ENST00000447765 522 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 RPL23AP81-201ENST00000455252 467 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AL133244.1-201ENST00000456007 258 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AC074250.1-201ENST00000511117 192 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 AC018442.3-201ENST00000523025 183 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 MIR4273-201ENST00000582824 84 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 MIR8069-1-201ENST00000616627 86 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 MIR8069-2-201ENST00000621412 86 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 RBBP8P1-201ENST00000449447 1844 ntBASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.31□□□□□ -1.56
NEDD1Q8NHV4 PCAT14-202ENST00000627127 3935 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.143-201ENST00000363520 106 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.261-201ENST00000364631 102 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 Y_RNA.533-201ENST00000384596 114 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 SNORD73A-201ENST00000386062 65 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RNU6-651P-201ENST00000411040 105 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 CTSL3P-202ENST00000412179 788 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RPL23AP36-201ENST00000413895 458 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RPL23AP38-201ENST00000423801 469 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RPS12P10-201ENST00000427031 377 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RNU7-138P-201ENST00000459479 64 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC053481.1-201ENST00000467217 306 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 RNU2-31P-201ENST00000516954 155 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC109479.2-201ENST00000517842 174 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC083809.1-201ENST00000615051 472 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 AC091895.1-201ENST00000624494 256 ntBASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.3□□□□□ -1.56
NEDD1Q8NHV4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms