Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 Z83843.1-201ENST00000604070 3685 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 Y_RNA.1-201ENST00000352915 104 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 RNU6-1097P-201ENST00000363586 107 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 SNORA23-201ENST00000365128 182 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 RPL21P24-201ENST00000413752 448 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC024082.2-201ENST00000434771 238 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC002486.1-201ENST00000435098 391 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC006028.1-201ENST00000438379 402 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC008481.1-201ENST00000463278 396 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC084357.1-201ENST00000473404 255 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC023194.1-201ENST00000493084 308 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AF213884.2-201ENST00000510417 903 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC114797.1-201ENST00000514003 728 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 RNU2-10P-201ENST00000516375 211 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 RNU1-103P-201ENST00000516502 125 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AP003034.1-201ENST00000534621 422 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC128657.1-201ENST00000549459 145 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 GLUD1P4-201ENST00000590914 418 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC090517.2-201ENST00000614966 680 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 U6atac.1-201ENST00000616025 117 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 SNHG22-203ENST00000617833 660 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 AC068647.1-201ENST00000489539 2265 ntBASIC3.66□□□□□ -1.82
VPS52Q8N1B4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VPS52Q8N1B4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS52Q8N1B4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
VPS52Q8N1B4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
VPS52Q8N1B4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VPS52Q8N1B4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 RNA5SP374-201ENST00000362939 125 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 SNORD56.2-201ENST00000363242 71 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 EI24P2-201ENST00000397776 1076 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AC110754.1-201ENST00000399740 601 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 CALM2P3-201ENST00000400429 449 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AL359634.1-202ENST00000404721 284 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 MIR548F1-201ENST00000408667 84 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 USP9YP18-201ENST00000425912 695 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 FCF1P1-201ENST00000432690 571 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 GPR143P-201ENST00000434155 205 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AC140076.1-201ENST00000449897 361 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 RPL21P8-201ENST00000465083 535 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 MLLT10P2-201ENST00000506434 249 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 RNU1-61P-201ENST00000516107 151 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 RNU6-314P-201ENST00000516574 104 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AP006245.1-201ENST00000522549 120 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 ARL2BPP2-201ENST00000550907 489 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AL355810.1-201ENST00000614629 552 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 AC009161.2-201ENST00000624626 138 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.65□□□□□ -1.83
VPS52Q8N1B4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS52Q8N1B4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RNU1-39P-201ENST00000383897 165 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 SNORA36C-201ENST00000384289 132 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 RNU6-39P-201ENST00000384344 107 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 Y_RNA.554-201ENST00000384672 102 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 MIR558-201ENST00000384920 94 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 OR2AS1P-201ENST00000427827 319 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 UBE2V1P8-201ENST00000437166 265 ntBASIC3.64□□□□□ -1.83
VPS52Q8N1B4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS52Q8N1B4 MTATP6P13-201ENST00000438531 667 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms