Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX5Q8N196 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SIX5Q8N196 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX5Q8N196 MIR548H3-201ENST00000408771 118 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 RNA5SP494-201ENST00000410653 129 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 RN7SKP100-201ENST00000411258 284 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AL117339.3-201ENST00000418733 162 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 RPEP5-201ENST00000441137 268 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIX5Q8N196 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AC010326.1-201ENST00000462726 602 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 RN7SL817P-201ENST00000480777 288 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX5Q8N196 HMGB3P17-201ENST00000504195 649 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 RNU6-612P-201ENST00000516909 102 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AC233702.9-201ENST00000581528 203 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.21□□□□□ -1.58
SIX5Q8N196 AC009318.2-201ENST00000610917 651 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 AC244107.2-201ENST00000611773 76 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 AC243829.7-201ENST00000633081 225 ntBASIC5.21□□□□□ -1.58
SIX5Q8N196 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SIX5Q8N196 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX5Q8N196 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX5Q8N196 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.21□□□□□ -1.58
SIX5Q8N196 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIX5Q8N196 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX5Q8N196 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AC087190.4-201ENST00000574616 8334 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SIX5Q8N196 RNU6-335P-201ENST00000364563 113 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 U3.13-201ENST00000364804 214 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SIX5Q8N196 MIR1193-201ENST00000408109 78 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 CYP4F29P-201ENST00000420685 446 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 AC096920.1-201ENST00000423991 241 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 AC007560.1-201ENST00000426912 237 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AL590383.1-201ENST00000428602 75 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 MTND5P15-201ENST00000434246 349 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX5Q8N196 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.2□□□□□ -1.58
SIX5Q8N196 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AC025755.1-201ENST00000521306 278 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.2□□□□□ -1.58
SIX5Q8N196 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 MIR6830-201ENST00000636015 70 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX5Q8N196 AC116096.1-201ENST00000566804 2314 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX5Q8N196 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 Z95331.1-201ENST00000623075 23112 ntBASIC5.2□□□□□ -1.58
SIX5Q8N196 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SIX5Q8N196 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX5Q8N196 AL034549.2-201ENST00000618285 3373 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SIX5Q8N196 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX5Q8N196 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SIX5Q8N196 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX5Q8N196 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX5Q8N196 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 MTCYBP2-201ENST00000407745 171 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX5Q8N196 AC139712.2-201ENST00000424302 339 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 AL590664.1-201ENST00000448065 339 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.19□□□□□ -1.58
SIX5Q8N196 RN7SKP210-201ENST00000459176 261 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 AC104164.2-201ENST00000496953 495 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 RN7SKP122-201ENST00000515923 296 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 SCARNA20.4-201ENST00000516969 131 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX5Q8N196 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SIX5Q8N196 MIR3936-201ENST00000584304 110 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX5Q8N196 Z73965.1-201ENST00000623412 2297 ntBASIC5.19□□□□□ -1.58
SIX5Q8N196 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
SIX5Q8N196 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SIX5Q8N196 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX5Q8N196 AC009962.1-201ENST00000567327 3813 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms