Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC010149.2-201ENST00000637608 315 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 Y_RNA.192-201ENST00000363977 102 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 RNU4-68P-201ENST00000364314 141 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 RN7SKP226-201ENST00000364912 300 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 Y_RNA.465-201ENST00000384293 102 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL355497.1-201ENST00000406262 551 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 MIR1284-201ENST00000408337 120 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 HMGB1P11-201ENST00000413899 637 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 PPP1R11P2-201ENST00000423543 382 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC007560.1-201ENST00000426912 237 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL035407.1-201ENST00000429211 571 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC002381.1-201ENST00000447049 280 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC107222.1-201ENST00000510899 637 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC109445.1-201ENST00000512356 383 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 MTATP6P9-201ENST00000515039 680 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 RNA5SP200-201ENST00000516360 103 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 RNU6-714P-201ENST00000516963 103 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AP002748.2-201ENST00000528671 348 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 OR6C7P-201ENST00000547875 934 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC068313.1-201ENST00000604028 1008 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC011451.2-201ENST00000604303 598 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC135507.1-201ENST00000607214 561 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC025594.3-201ENST00000613068 790 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL449363.1-201ENST00000617815 186 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AL159972.1-201ENST00000625150 448 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 AC093591.3-201ENST00000634516 308 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 OR4G2P-202ENST00000641004 1759 ntBASIC2.26□□□□□ -2.05
CDKL3Q8IVW4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RNU6-741P-201ENST00000383889 107 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RNU6-925P-201ENST00000384629 104 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RNU6-920P-201ENST00000410926 92 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC018630.2-202ENST00000422992 927 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AL953862.1-201ENST00000423016 168 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 Z82210.1-201ENST00000440037 231 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 MTND5P14-201ENST00000441481 1267 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RPL21P134-201ENST00000453468 483 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC134050.1-201ENST00000495088 933 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC119751.4-201ENST00000507498 357 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC116353.3-201ENST00000511215 249 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 SNORD14A-201ENST00000606526 91 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AL158211.4-201ENST00000606988 584 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 RNU4-5P-201ENST00000607255 135 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC002550.2-201ENST00000621246 394 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 AC008443.7-201ENST00000622195 246 ntBASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CDKL3Q8IVW4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 BX119904.4-201ENST00000424402 301 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC092648.1-201ENST00000425870 423 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 GTF2IP20-201ENST00000431663 360 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 HSFY7P-201ENST00000432672 318 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 HSFY8P-201ENST00000437934 318 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 RPL7P36-201ENST00000444633 681 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 MTND2P24-201ENST00000453434 806 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 HSFY5P-201ENST00000453726 309 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 ANKRD26P4-201ENST00000455755 950 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 RPL30P9-201ENST00000465586 330 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 RPL23AP49-201ENST00000492925 468 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 GZMAP1-201ENST00000503054 631 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC021146.8-201ENST00000507455 733 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AP003122.3-201ENST00000526316 255 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms