Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Y_RNA.100-201ENST00000363141 102 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MIR585-201ENST00000384887 94 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 CISD1P1-201ENST00000393907 327 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 RPS4XP9-201ENST00000405151 780 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 HSPE1P8-201ENST00000406997 288 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 ARL5AP1-201ENST00000418991 388 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC004801.2-202ENST00000463559 283 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC012181.1-201ENST00000479895 423 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC083904.1-201ENST00000487828 231 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AL049874.1-201ENST00000489560 388 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC091167.1-201ENST00000492017 396 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 RN7SL604P-201ENST00000492589 296 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 FGF7P4-201ENST00000509595 295 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 FAM206BP-201ENST00000510179 541 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC093840.1-201ENST00000511599 336 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 SNORA31.3-201ENST00000516029 96 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC105029.1-201ENST00000520250 669 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MIR4795-201ENST00000584182 89 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AC174048.1-201ENST00000603389 144 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AL138889.2-201ENST00000603883 242 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 AP001330.4-201ENST00000604350 154 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 uc_338.5-201ENST00000611839 155 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 RMST_7.1-201ENST00000621935 268 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 TPTEP1-208ENST00000636884 213 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MTND5P42-201ENST00000637720 498 ntBASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.6□□□□□ -1.83
PTCHD4Q6ZW05 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 OR4G2P-202ENST00000641004 1759 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-831P-201ENST00000384548 107 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.535-201ENST00000384612 99 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AL451054.2-201ENST00000420896 202 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 HMGN2P20-201ENST00000437531 273 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 PRPS1P1-201ENST00000445305 876 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC104058.1-201ENST00000448028 297 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RPL23AP31-201ENST00000456160 467 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 snoU13.4-201ENST00000458916 104 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 SCARNA18-201ENST00000459004 134 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-1208P-201ENST00000459588 107 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-329P-201ENST00000459618 107 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RN7SL330P-201ENST00000469709 307 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 UQCRHP4-201ENST00000471686 272 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RNA5SP468-201ENST00000516782 93 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 RN7SKP256-201ENST00000517201 314 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 MED28P6-201ENST00000558776 231 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC026464.5-201ENST00000562497 722 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC005668.1-201ENST00000571142 476 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AC005498.1-201ENST00000592125 465 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 CTHRC1P1-201ENST00000605383 469 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AL121757.2-201ENST00000611223 313 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AL359547.2-201ENST00000615810 418 ntBASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCHD4Q6ZW05 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.84
PTCHD4Q6ZW05 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PTCHD4Q6ZW05 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PTCHD4Q6ZW05 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.59□□□□□ -1.84
PTCHD4Q6ZW05 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.59□□□□□ -1.84
PTCHD4Q6ZW05 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.167-201ENST00000363735 109 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 Y_RNA.184-201ENST00000363884 108 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 U3.12-201ENST00000364498 214 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-1127P-201ENST00000384580 107 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-817P-201ENST00000391083 104 ntBASIC3.58□□□□□ -1.84
PTCHD4Q6ZW05 AL139039.1-201ENST00000401900 692 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms