Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC007390.1-201ENST00000415722 356 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC099677.1-201ENST00000420575 175 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AL645937.1-202ENST00000421799 937 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPL35AP12-201ENST00000425362 338 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 MTCO3P46-201ENST00000425787 232 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC008850.1-201ENST00000427546 362 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPL7L1P10-201ENST00000427790 463 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 ERLEC1P1-201ENST00000433806 578 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 KCTD9P3-201ENST00000434597 1169 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC004866.2-201ENST00000438285 481 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 MTND1P18-201ENST00000448191 573 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPS3AP46-201ENST00000448352 682 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 PRSS3P4-201ENST00000453323 162 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 CEACAMP4-201ENST00000457676 421 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 snoU13.24-201ENST00000458998 104 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RNU7-180P-201ENST00000459240 63 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPL9P32-201ENST00000464118 620 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPS4XP13-201ENST00000483219 789 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC110768.1-201ENST00000509222 400 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 FGF7P4-201ENST00000509595 295 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 EXOC5P1-201ENST00000510543 1969 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RNU6-1314P-201ENST00000517139 104 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 BTF3P12-201ENST00000519620 469 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 NCAPGP2-201ENST00000557911 754 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 VN1R80P-201ENST00000597126 338 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 MTND4P35-201ENST00000604257 1375 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC130324.3-201ENST00000614165 542 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC025034.2-201ENST00000623264 286 ntBASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf139Q6ZV77 AC018555.1-201ENST00000567548 1980 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC006026.1-201ENST00000444025 1803 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 MIR208A-201ENST00000362287 71 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RNU4-76P-201ENST00000364509 141 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 SNORA23-201ENST00000365128 182 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RNU4-66P-201ENST00000365199 138 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 Y_RNA.576-201ENST00000384781 102 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL122016.1-201ENST00000403365 367 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RNU2-43P-201ENST00000410306 190 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RNU2-29P-201ENST00000410423 189 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 EEF1A1P40-201ENST00000412883 573 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 PPP1R11P2-201ENST00000423543 382 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RPL21P66-201ENST00000426566 466 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RPL36AP6-201ENST00000435770 321 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL356535.1-201ENST00000440335 398 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 MRPL50P4-201ENST00000446432 475 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 RPL21P99-201ENST00000480369 423 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 TTC39CP1-201ENST00000512513 755 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 Y_RNA.665-201ENST00000516177 98 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC008489.1-201ENST00000524271 483 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 CBX3P7-201ENST00000532876 502 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC018630.1-201ENST00000541376 925 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 BNIP3P6-201ENST00000549284 499 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 MIR4795-201ENST00000584182 89 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AF038458.1-201ENST00000588406 262 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 U3.45-201ENST00000607547 219 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AL132765.2-201ENST00000610812 351 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC135507.2-201ENST00000612443 309 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 AC010133.1-201ENST00000615809 842 ntBASIC3.05□□□□□ -1.92
C9orf139Q6ZV77 FRG1KP-201ENST00000623592 341 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms