Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC108022.1-201ENST00000493466 478 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC015795.1-201ENST00000513669 327 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC087369.1-201ENST00000520775 996 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC007991.1-201ENST00000522680 631 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC040926.1-201ENST00000530195 238 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC107918.3-201ENST00000533272 382 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 MIR4270-201ENST00000581799 70 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC125232.2-201ENST00000592457 143 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC016727.2-201ENST00000603988 621 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 MIR6853-201ENST00000619642 74 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 AC015967.1-201ENST00000619893 476 ntBASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF111Q6ZNA4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 AC008669.1-201ENST00000565823 2178 ntBASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.222-201ENST00000364264 102 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 RNU4-42P-201ENST00000364738 142 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 RNU6-472P-201ENST00000384299 107 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.577-201ENST00000384794 101 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 MIR298-201ENST00000401212 88 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AL603908.1-201ENST00000406098 201 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 RN7SKP267-201ENST00000410381 285 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 RNU6-174P-201ENST00000410406 106 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC108032.1-201ENST00000416706 207 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 OR2AQ1P-201ENST00000451972 200 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC079168.2-201ENST00000453977 416 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 FTH1P2-201ENST00000466086 412 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 RNU2-53P-201ENST00000516257 147 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 IGKV1-32-201ENST00000519290 311 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 IGHV3-76-201ENST00000522465 295 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 CBX3P8-201ENST00000532412 525 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 MIR4273-201ENST00000582824 84 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 BDH2P1-201ENST00000602288 736 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AC010201.1-201ENST00000605051 540 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 MTND4LP5-201ENST00000605152 292 ntBASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF111Q6ZNA4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 SNORD74.4-201ENST00000364129 80 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.552-201ENST00000384665 112 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RNU6-837P-201ENST00000391056 108 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RNU6-607P-201ENST00000411283 108 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 CYCSP33-201ENST00000414485 327 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC004552.1-201ENST00000419089 348 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL451062.2-201ENST00000427515 271 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL592045.1-201ENST00000429867 352 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 H2AFZP5-201ENST00000446960 382 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL359073.1-201ENST00000448036 403 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RPS24P6-201ENST00000452670 400 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RNU7-169P-201ENST00000459456 61 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 RPS26P3-201ENST00000470205 348 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 FO393415.2-201ENST00000480085 343 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC090543.2-201ENST00000483963 348 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC004057.1-201ENST00000485827 348 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC083829.1-201ENST00000503756 657 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AP000889.1-201ENST00000530968 660 ntBASIC4.39□□□□□ -1.71
RNF111Q6ZNA4 AL110118.1-201ENST00000553543 400 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms