Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC007494.3-201ENST00000624660 743 ntBASIC2.92□□□□□ -1.94
CASC4Q6P4E1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CASC4Q6P4E1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RNA5SP139-201ENST00000364340 117 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RNU6-701P-201ENST00000384059 107 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RNU2-36P-201ENST00000410361 191 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RNU2-62P-201ENST00000410868 191 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 ZNF90P2-204ENST00000419323 1075 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 ELOCP14-201ENST00000428070 331 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RPS6P15-201ENST00000431996 751 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 MTND1P28-201ENST00000435623 950 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 ELOCP7-201ENST00000439968 331 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 CYCSP32-201ENST00000440548 321 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RPL37P4-201ENST00000448908 268 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 SSXP1-201ENST00000453640 473 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 BX510359.1-201ENST00000456973 237 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC092798.1-201ENST00000458542 409 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RBM43P1-201ENST00000476891 1081 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 RPS27P26-201ENST00000494583 239 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 DSTNP2-201ENST00000504533 515 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC098862.1-201ENST00000504991 413 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 PSMA2P1-201ENST00000526365 646 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AP002404.1-201ENST00000532005 451 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC074050.1-201ENST00000563247 211 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 HMGN2P15-201ENST00000585707 270 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AL161798.1-201ENST00000604630 131 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC007619.2-201ENST00000605743 379 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AL627309.6-201ENST00000606857 840 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC103710.2-201ENST00000609912 942 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC138749.5-201ENST00000611461 208 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC004852.3-201ENST00000614131 326 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC034102.8-201ENST00000615146 484 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC116165.2-201ENST00000616705 206 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC084035.1-201ENST00000634543 607 ntBASIC2.91□□□□□ -1.94
CASC4Q6P4E1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CASC4Q6P4E1 AC000403.1-201ENST00000613696 3585 ntBASIC2.9□□□□□ -1.94
CASC4Q6P4E1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.94
CASC4Q6P4E1 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RNA5SP374-201ENST00000362939 125 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RNU6-511P-201ENST00000363496 107 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RNU6-884P-201ENST00000363889 107 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 RPL19P1-201ENST00000411635 428 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL139281.1-201ENST00000422120 335 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC019097.1-201ENST00000424783 735 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL356583.2-201ENST00000426536 280 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC009414.1-201ENST00000427200 443 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 MED14P1-201ENST00000430517 648 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 UBE2D3P4-201ENST00000441973 436 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 WASF1P1-201ENST00000447560 1131 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 CECR9-201ENST00000453421 199 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 SUMO2P6-201ENST00000505273 288 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC009901.1-201ENST00000506703 541 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AP003181.2-201ENST00000528941 181 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 H3F3AP1-201ENST00000559984 334 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC012065.4-201ENST00000602445 679 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 MTND4LP5-201ENST00000605152 292 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC004805.2-201ENST00000605382 482 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AL031775.1-201ENST00000607014 887 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 AC068880.5-201ENST00000624331 290 ntBASIC2.9□□□□□ -1.95
CASC4Q6P4E1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CASC4Q6P4E1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CASC4Q6P4E1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CASC4Q6P4E1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms