Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RNU6-626P-201ENST00000363354 107 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RNU6-959P-201ENST00000384671 107 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 Y_RNA.570-201ENST00000384750 101 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 Y_RNA.580-201ENST00000391004 95 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 UBA52P6-201ENST00000399822 382 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RPL17P36-201ENST00000420302 549 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 CYP4F29P-201ENST00000420685 446 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AL356867.1-201ENST00000429623 299 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 GAPDHP25-201ENST00000447061 1001 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RPL30P1-201ENST00000488676 339 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AC074133.1-201ENST00000515696 183 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RNY3P16-201ENST00000516338 101 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AP005660.1-201ENST00000522972 293 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AL133399.1-201ENST00000527476 298 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 MIR4308-201ENST00000580634 81 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AC124916.2-201ENST00000604416 224 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 AC126915.2-201ENST00000610957 190 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 RN7SL261P-201ENST00000613441 282 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 MTND1P7-201ENST00000632801 297 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 LINC02495-203ENST00000636704 242 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 SALL4P2-201ENST00000423288 2910 ntBASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDPF1Q6NVV7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CDPF1Q6NVV7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RNA5SP361-201ENST00000362686 118 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 SNORD16-201ENST00000362803 99 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RN7SKP78-201ENST00000364711 318 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 Y_RNA.308-201ENST00000365043 101 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 GCNT1P4-201ENST00000404096 329 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RN7SKP16-201ENST00000410180 299 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RNU6-735P-201ENST00000410612 107 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC098614.2-201ENST00000426040 255 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC016027.4-201ENST00000450866 277 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RPS5P7-201ENST00000456664 608 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC108145.1-201ENST00000503770 153 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 ZNF519P4-201ENST00000514008 125 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RNA5SP165-201ENST00000517142 115 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC134698.5-201ENST00000519444 336 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 IGHV4-55-201ENST00000520889 368 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 BNIP3P1-201ENST00000547295 580 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AL353743.1-202ENST00000431724 1695 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AC020656.2-201ENST00000613291 5309 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 AL137141.1-201ENST00000624622 4836 ntBASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.21□□□□□ -1.74
CDPF1Q6NVV7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDPF1Q6NVV7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms