Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VARS2Q5ST30 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 UBE2L2-201ENST00000254302 429 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 U3.9-201ENST00000363823 204 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 SNORA51.5-201ENST00000384126 131 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 RNU6-1124P-201ENST00000384169 107 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 U8.10-201ENST00000384260 133 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 RNY1P7-201ENST00000384743 110 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 MIR135A2-201ENST00000384854 100 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 CYCSP49-201ENST00000420810 319 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 REREP1Y-201ENST00000422655 198 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 RPS27AP12-201ENST00000429552 465 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 REREP2Y-201ENST00000439103 200 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 RPS26P45-201ENST00000471748 340 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC004980.4-201ENST00000513375 203 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 RN7SKP43-201ENST00000516173 320 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 FTH1P11-201ENST00000517577 551 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 MIR4311-201ENST00000580794 100 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 MIR4420-201ENST00000583944 77 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC091178.2-201ENST00000584401 117 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC004467.1-201ENST00000615678 330 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 MIR6864-201ENST00000617935 70 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC068870.2-201ENST00000620635 389 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC091932.3-201ENST00000624223 323 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 AC099654.7-201ENST00000635788 2127 ntBASIC5.98□□□□□ -1.45
VARS2Q5ST30 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
VARS2Q5ST30 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VARS2Q5ST30 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 U8.1-201ENST00000362843 134 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 Y_RNA.163-201ENST00000363702 113 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNU6-597P-201ENST00000365620 102 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNU6-969P-201ENST00000383900 105 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNU2-54P-201ENST00000410299 190 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 AL590762.4-201ENST00000425885 253 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 AC138761.5-201ENST00000433967 325 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 CYCSP12-201ENST00000437729 300 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 AC090804.1-201ENST00000448870 490 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 EIF4A1P11-201ENST00000451239 222 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNU6-625P-201ENST00000459412 107 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 RN7SL172P-201ENST00000460535 303 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNU6-781P-201ENST00000516377 101 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 CYP4A27P-201ENST00000567218 190 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 AC025574.2-201ENST00000615621 514 ntBASIC5.97□□□□□ -1.45
VARS2Q5ST30 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VARS2Q5ST30 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.97□□□□□ -1.45
VARS2Q5ST30 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.96□□□□□ -1.45
VARS2Q5ST30 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.45
VARS2Q5ST30 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VARS2Q5ST30 AL136164.4-201ENST00000625013 2135 ntBASIC5.96□□□□□ -1.45
VARS2Q5ST30 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VARS2Q5ST30 IQCB2P-201ENST00000401788 1633 ntBASIC5.96□□□□□ -1.45
VARS2Q5ST30 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VARS2Q5ST30 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.96□□□□□ -1.45
VARS2Q5ST30 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VARS2Q5ST30 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 Y_RNA.120-201ENST00000363304 110 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 RNU6-1048P-201ENST00000364054 107 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 Y_RNA.220-201ENST00000364244 109 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 Y_RNA.329-201ENST00000365209 107 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 GNG5P2-201ENST00000372054 207 ntBASIC5.96□□□□□ -1.46
VARS2Q5ST30 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
VARS2Q5ST30 SNORA56-201ENST00000383966 129 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms