Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL049874.1-201ENST00000489560 388 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 GMPSP1-201ENST00000514075 579 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 RN7SKP18-201ENST00000516005 275 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC007991.1-201ENST00000522680 631 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC093012.1-202ENST00000549403 582 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 MED28P6-201ENST00000558776 231 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 HMGB1P6-201ENST00000569046 646 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC011712.1-201ENST00000588959 234 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SLC44A4Q53GD3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RNU6-767P-201ENST00000384132 107 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 FAT1P1-201ENST00000406588 507 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC007390.1-201ENST00000415722 356 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RPL21P66-201ENST00000426566 466 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL159987.2-201ENST00000432754 307 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC016691.1-201ENST00000441321 413 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 CALM1P1-201ENST00000442082 433 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RNU7-63P-201ENST00000459054 62 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 MRPS17P3-201ENST00000465453 385 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC083798.1-201ENST00000472671 131 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC116562.3-201ENST00000506136 177 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC010486.1-201ENST00000511793 424 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RNA5SP401-201ENST00000515920 127 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RNU6-835P-201ENST00000516974 104 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC068587.5-201ENST00000528506 175 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC012182.1-201ENST00000570133 895 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC024619.4-201ENST00000580924 316 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AP001029.3-201ENST00000588063 596 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC006116.10-201ENST00000591836 581 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AL354950.2-201ENST00000617939 290 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 AC024940.5-201ENST00000622889 474 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 GABPAP-201ENST00000419271 1356 ntBASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
SLC44A4Q53GD3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SLC44A4Q53GD3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SLC44A4Q53GD3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 RNU6-845P-201ENST00000362578 103 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 RNU5A-1-201ENST00000362698 116 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 SNORD81.2-201ENST00000365153 76 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 SNORA69-201ENST00000383895 132 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 SNORA24.1-201ENST00000384401 135 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 MIR1251-201ENST00000408552 70 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 RPS20P15-201ENST00000412792 311 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 PDCL2P1-201ENST00000419302 352 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC126389.1-201ENST00000477436 290 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 HSPE1P6-201ENST00000479457 291 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 SNORA40.12-201ENST00000516329 111 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AC087369.1-201ENST00000520775 996 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 OR5B19P-201ENST00000531766 928 ntBASIC3.96□□□□□ -1.78
SLC44A4Q53GD3 OR5B10P-201ENST00000532869 642 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms