Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP000776.1-201ENST00000530032 1663 ntBASIC2.31□□□□□ -2.04
PTPN20Q4JDL3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN20Q4JDL3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 RNU6-744P-201ENST00000365557 107 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 RNU6-1316P-201ENST00000384242 108 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 RNU6-754P-201ENST00000391166 107 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 ELOCP9-201ENST00000418624 239 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 TXNL1P1-201ENST00000429528 554 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC233279.1-201ENST00000455300 423 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC104090.1-201ENST00000506341 1171 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC119751.4-201ENST00000507498 357 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AL391261.3-201ENST00000557194 520 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC022662.1-201ENST00000580252 331 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 UBE2L4-201ENST00000587688 464 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC106052.1-201ENST00000608029 497 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC013476.2-201ENST00000614456 459 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AL158801.5-201ENST00000623123 465 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AL159972.1-201ENST00000625150 448 ntBASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPN20Q4JDL3 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 CCT4P2-201ENST00000233836 1548 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RN7SKP226-201ENST00000364912 300 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RNU1-73P-201ENST00000383971 164 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RNU6-114P-201ENST00000384704 105 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AL356421.1-201ENST00000403255 413 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 USP9YP33-201ENST00000412220 421 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MTND1P21-201ENST00000412991 285 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC092648.1-201ENST00000425870 423 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MTCO3P30-201ENST00000426425 670 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 USP9YP35-201ENST00000435696 412 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SNRPEP7-201ENST00000438350 220 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AL049734.2-201ENST00000441066 616 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RPL7P36-201ENST00000444633 681 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 CBWD4P-201ENST00000445695 655 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MTCO1P27-201ENST00000448269 226 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 GZMAP1-201ENST00000503054 631 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 NRON-201ENST00000517270 370 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 MYL12BP1-201ENST00000569826 507 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 HMGN2P15-201ENST00000585707 270 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RPP40P2-201ENST00000603596 712 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AL356280.1-201ENST00000603614 379 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC112220.3-201ENST00000605502 502 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC080013.3-201ENST00000606839 578 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC107294.1-201ENST00000609524 467 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC009268.2-201ENST00000621925 457 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 AC022336.2-201ENST00000568966 2538 ntBASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN20Q4JDL3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 RNU6-289P-201ENST00000364093 107 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 AL590084.2-201ENST00000401481 382 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 AC008850.1-201ENST00000427546 362 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 AC004854.1-201ENST00000440356 349 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 COX6CP12-201ENST00000446748 202 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 AL118520.1-201ENST00000450770 291 ntBASIC2.28□□□□□ -2.04
PTPN20Q4JDL3 RBM43P1-201ENST00000476891 1081 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms