Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 HSPE1P11-201ENST00000339579 310 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 RNU4-35P-201ENST00000362588 141 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 SNORD56.2-201ENST00000363242 71 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 RNU6-946P-201ENST00000383878 107 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AL031121.1-201ENST00000406553 254 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AL513475.1-201ENST00000406602 315 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AC092809.3-201ENST00000415453 231 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AC096649.2-201ENST00000416186 393 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN1BQ07699 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AL445567.1-201ENST00000439121 144 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 TAF9P1-201ENST00000445421 515 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 TAF9P2-201ENST00000454958 515 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AC093899.1-201ENST00000457984 376 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AC106707.2-201ENST00000484182 374 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AP003467.2-201ENST00000520175 319 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 HMGB1P41-201ENST00000520234 440 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 BNIP3P33-201ENST00000598912 569 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 CKS1BP3-201ENST00000600888 237 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AL161734.1-201ENST00000609720 557 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AL356321.1-201ENST00000621360 228 ntBASIC2.84□□□□□ -1.95
SCN1BQ07699 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
SCN1BQ07699 AL137003.2-201ENST00000606924 2538 ntBASIC2.84□□□□□ -1.96
SCN1BQ07699 MTND4P4-201ENST00000439033 1366 ntBASIC2.84□□□□□ -1.96
SCN1BQ07699 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
SCN1BQ07699 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN1BQ07699 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN1BQ07699 NACAP2-201ENST00000318548 624 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RN7SKP226-201ENST00000364912 300 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AL512633.1-201ENST00000399931 655 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AL356057.2-201ENST00000403318 432 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 Y_RNA.598-201ENST00000410480 95 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RPS29P4-201ENST00000414733 161 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 ELOCP4-201ENST00000420090 333 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC092427.1-202ENST00000430569 476 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 HMGN2P31-201ENST00000432430 273 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 USP9YP15-201ENST00000442391 422 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 MTATP6P7-201ENST00000453315 681 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AC007182.2-201ENST00000489251 402 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC002456.2-201ENST00000509356 380 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 Y_RNA.672-201ENST00000516289 104 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RNU6-703P-201ENST00000516946 107 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RN7SKP40-201ENST00000517211 242 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 COX6CP5-201ENST00000527162 228 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 OR5B10P-201ENST00000532869 642 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC009977.1-201ENST00000586015 570 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 AC022893.3-201ENST00000607665 437 ntBASIC2.83□□□□□ -1.96
SCN1BQ07699 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN1BQ07699 RNU6-960P-201ENST00000364056 120 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 RNU6-39P-201ENST00000384344 107 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 SNORD17-201ENST00000390930 237 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 SNORD88.1-201ENST00000408684 91 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 BX323014.1-201ENST00000412876 237 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN1BQ07699 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC092447.3-201ENST00000426027 686 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 CYCSP4-201ENST00000429682 331 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC018644.1-201ENST00000429934 551 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 RPS6P15-201ENST00000431996 751 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN1BQ07699 RPL21P23-201ENST00000446654 460 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 HMGN2P10-201ENST00000448085 265 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 MTCO2P29-201ENST00000465212 189 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 RN7SL542P-201ENST00000467147 294 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AP004217.1-201ENST00000480579 346 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 RPS15AP34-201ENST00000487776 387 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN1BQ07699 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 IGKV2-26-201ENST00000518305 343 ntBASIC2.82□□□□□ -1.96
SCN1BQ07699 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN1BQ07699 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms