Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SUMO1P4-201ENST00000429430 302 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AL714022.1-201ENST00000439897 151 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC009961.3-201ENST00000449832 765 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS1Q01581 OR6C5P-201ENST00000452388 923 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AP000852.1-201ENST00000472460 573 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC116337.2-201ENST00000477662 156 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 RPL31P41-201ENST00000477967 372 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 RPS15AP34-201ENST00000487776 387 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC135721.1-201ENST00000497954 479 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC114781.4-201ENST00000513707 639 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 RNA5SP216-201ENST00000516111 123 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 RNU6-1256P-201ENST00000516539 103 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 MIR544B-201ENST00000582372 78 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 MIR4999-201ENST00000585029 91 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC234772.3-201ENST00000602277 528 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC007621.1-201ENST00000604544 437 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AL139344.1-201ENST00000605228 195 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 BCRP9-201ENST00000605312 388 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC072039.2-201ENST00000608883 439 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC245517.5-201ENST00000611529 162 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC034102.8-201ENST00000615146 484 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC079395.3-201ENST00000615161 484 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 PCMTD1P7-201ENST00000634506 357 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGCS1Q01581 AC009902.3-201ENST00000606235 2172 ntBASIC2.29□□□□□ -2.04
HMGCS1Q01581 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGCS1Q01581 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 MTND5P33-201ENST00000571250 1450 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 MTND4P16-201ENST00000466108 1367 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 U3.12-201ENST00000364498 214 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC119751.3-201ENST00000399720 670 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 TPMTP3-201ENST00000411928 735 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 AL022400.1-201ENST00000423946 935 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGCS1Q01581 AL035407.1-201ENST00000429211 571 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC236972.1-201ENST00000433225 199 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 TAAR7P-201ENST00000436141 242 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 UBE2V1P13-201ENST00000436983 439 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 FAM103A2P-201ENST00000444122 354 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC009237.8-201ENST00000445492 379 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 WASF1P1-201ENST00000447560 1131 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 TPT1P14-201ENST00000448018 505 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGCS1Q01581 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HMGCS1Q01581 ATG12P2-201ENST00000456830 416 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 SNORA59A-201ENST00000459326 152 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 MTND4LP3-201ENST00000468320 276 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 UBE2DNL-203ENST00000474922 222 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AL135752.1-201ENST00000479477 471 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 LINC00888-204ENST00000487386 421 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 RPL37P25-201ENST00000507308 276 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 RNU1-104P-201ENST00000517280 175 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 OR4R1P-201ENST00000529879 463 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC013828.2-201ENST00000532487 235 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 OR1M4P-201ENST00000589199 287 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 BNIP3P23-201ENST00000599655 511 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC021171.1-201ENST00000603137 706 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC105148.1-201ENST00000604961 409 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC026790.2-201ENST00000606282 430 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 AC009268.2-201ENST00000621925 457 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AL159972.1-201ENST00000625150 448 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
HMGCS1Q01581 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.28□□□□□ -2.04
HMGCS1Q01581 OR5H6-203ENST00000642105 978 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms