Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 KC877373.1-201ENST00000479066 408 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AL049830.2-201ENST00000480072 201 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.09□□□□□ -1.91
CDK3Q00526 RN7SKP298-201ENST00000515950 94 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 RNU6-927P-201ENST00000516199 100 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 RNU6-1092P-201ENST00000516955 87 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 RNU6-430P-201ENST00000517078 107 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 RNA5SP291-201ENST00000517222 105 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CDK3Q00526 HMGB1P41-201ENST00000520234 440 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AP006587.4-201ENST00000526053 529 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 AC087883.1-201ENST00000551882 391 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 TRAV28-201ENST00000557548 323 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.09□□□□□ -1.91
CDK3Q00526 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK3Q00526 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK3Q00526 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 AC245014.2-201ENST00000603689 287 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 HSPE1P7-201ENST00000604681 321 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AC246785.4-201ENST00000605374 287 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AC064807.4-201ENST00000607201 407 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AL589743.7-201ENST00000612637 233 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 AL162274.2-201ENST00000614406 332 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 XIST_intron.1-201ENST00000619444 68 ntBASIC3.09□□□□□ -1.91
CDK3Q00526 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
CDK3Q00526 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDK3Q00526 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CDK3Q00526 AL049641.1-201ENST00000441055 1948 ntBASIC3.09□□□□□ -1.92
CDK3Q00526 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDK3Q00526 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 RNU1-75P-201ENST00000347264 129 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 RNU6-525P-201ENST00000363685 104 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 Y_RNA.559-201ENST00000384686 107 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDK3Q00526 RNU2-33P-201ENST00000410344 192 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AL663109.1-201ENST00000411498 844 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 VN1R108P-201ENST00000431580 830 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 NEFMP1-201ENST00000443423 1006 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 MTCO2P7-201ENST00000446518 666 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 TPT1P7-201ENST00000458300 517 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 RN7SL330P-201ENST00000469709 307 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AL135752.1-201ENST00000479477 471 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.08□□□□□ -1.92
CDK3Q00526 MTCO3P7-201ENST00000510008 774 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK3Q00526 MTND1P15-201ENST00000579262 949 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AC103987.3-201ENST00000582071 292 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AL160281.1-201ENST00000605307 311 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AL136363.1-201ENST00000605349 337 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 AC007619.2-201ENST00000605743 379 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AP002360.4-201ENST00000606980 481 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AC011939.3-201ENST00000613686 466 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 MTND1P37-201ENST00000636562 264 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK3Q00526 FAM35BP-202ENST00000497389 3337 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDK3Q00526 CR848007.1-201ENST00000442354 1699 ntBASIC3.08□□□□□ -1.92
CDK3Q00526 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK3Q00526 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
CDK3Q00526 RNU6-188P-201ENST00000364207 107 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 RNU6-169P-201ENST00000365336 107 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 SMIM11P1-201ENST00000369586 178 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 OR5H15-201ENST00000383696 930 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 MIR591-201ENST00000385290 95 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AL138885.1-201ENST00000405921 675 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 RNU6-1077P-201ENST00000410506 102 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK3Q00526 MTND3P17-201ENST00000416968 344 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 ZNF90P2-204ENST00000419323 1075 ntBASIC3.07□□□□□ -1.92
CDK3Q00526 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK3Q00526 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK3Q00526 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms