Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RAE1P78406 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.52□□□□□ -1.85
RAE1P78406 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
RAE1P78406 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RAE1P78406 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RAE1P78406 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.51□□□□□ -1.85
RAE1P78406 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RAE1P78406 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RAE1P78406 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RAE1P78406 RNU6-600P-201ENST00000362524 99 ntBASIC3.51□□□□□ -1.85
RAE1P78406 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RAE1P78406 CISD1P1-201ENST00000393907 327 ntBASIC3.51□□□□□ -1.85
RAE1P78406 RPL32P23-201ENST00000397237 405 ntBASIC3.51□□□□□ -1.85
RAE1P78406 Y_RNA.615-201ENST00000410769 117 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL645937.1-202ENST00000421799 937 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL591704.1-201ENST00000432574 275 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.51□□□□□ -1.85
RAE1P78406 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.51□□□□□ -1.85
RAE1P78406 RPL7P12-201ENST00000446719 750 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL590639.1-201ENST00000456484 337 ntBASIC3.51□□□□□ -1.85
RAE1P78406 RNU6-1208P-201ENST00000459588 107 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AC007547.1-201ENST00000462177 490 ntBASIC3.51□□□□□ -1.85
RAE1P78406 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.51□□□□□ -1.85
RAE1P78406 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.51□□□□□ -1.85
RAE1P78406 MTCO3P9-201ENST00000506989 781 ntBASIC3.51□□□□□ -1.85
RAE1P78406 VWA8P1-201ENST00000510889 176 ntBASIC3.51□□□□□ -1.85
RAE1P78406 MIR2116-201ENST00000517221 80 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AC087241.2-201ENST00000535801 324 ntBASIC3.51□□□□□ -1.85
RAE1P78406 RAB11AP2-201ENST00000545905 639 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL118558.2-201ENST00000556294 238 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.51□□□□□ -1.85
RAE1P78406 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.51□□□□□ -1.85
RAE1P78406 AC002545.1-201ENST00000592511 181 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL117336.2-201ENST00000602435 335 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL670379.4-201ENST00000605279 254 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AC022893.3-201ENST00000607665 437 ntBASIC3.51□□□□□ -1.85
RAE1P78406 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.51□□□□□ -1.85
RAE1P78406 AC034102.8-201ENST00000615146 484 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AL359314.1-201ENST00000616913 261 ntBASIC3.51□□□□□ -1.85
RAE1P78406 AC009248.2-201ENST00000619826 254 ntBASIC3.51□□□□□ -1.85
RAE1P78406 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RAE1P78406 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 AC007685.1-201ENST00000329806 452 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-288P-201ENST00000363690 104 ntBASIC3.5□□□□□ -1.85
RAE1P78406 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.5□□□□□ -1.85
RAE1P78406 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
RAE1P78406 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-116P-201ENST00000384042 109 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-1127P-201ENST00000384580 107 ntBASIC3.5□□□□□ -1.85
RAE1P78406 MT-TD-201ENST00000387419 68 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-510P-201ENST00000391239 108 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-628P-201ENST00000410675 107 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RNU6-1148P-201ENST00000410992 104 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RPS12P24-201ENST00000412619 387 ntBASIC3.5□□□□□ -1.85
RAE1P78406 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.5□□□□□ -1.85
RAE1P78406 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.5□□□□□ -1.85
RAE1P78406 AL356867.1-201ENST00000429623 299 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RPS29P7-201ENST00000439662 171 ntBASIC3.5□□□□□ -1.85
RAE1P78406 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.5□□□□□ -1.85
RAE1P78406 AL133162.1-201ENST00000463228 453 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RPS20P22-201ENST00000473700 357 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.5□□□□□ -1.85
RAE1P78406 Y_RNA.654-201ENST00000497848 106 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC020593.1-201ENST00000507399 299 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 SNORA70.16-201ENST00000516390 95 ntBASIC3.5□□□□□ -1.85
RAE1P78406 RPL7P20-201ENST00000520308 745 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.5□□□□□ -1.85
RAE1P78406 AC243972.3-201ENST00000539655 198 ntBASIC3.5□□□□□ -1.85
RAE1P78406 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.5□□□□□ -1.85
RAE1P78406 PSMA3P-201ENST00000555485 635 ntBASIC3.5□□□□□ -1.85
RAE1P78406 MIR4286-201ENST00000580651 93 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.5□□□□□ -1.85
RAE1P78406 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 AC013553.2-201ENST00000604244 589 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AL158032.1-201ENST00000605401 106 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.5□□□□□ -1.85
RAE1P78406 AC092807.2-201ENST00000609367 243 ntBASIC3.5□□□□□ -1.85
RAE1P78406 AC005344.1-201ENST00000613391 459 ntBASIC3.5□□□□□ -1.85
RAE1P78406 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 AC008725.1-201ENST00000605123 2263 ntBASIC3.5□□□□□ -1.85
RAE1P78406 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RAE1P78406 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RAE1P78406 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RAE1P78406 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RAE1P78406 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms