Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 U8.8-201ENST00000365399 135 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 AC069282.1-201ENST00000411911 526 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 RPL12P25-201ENST00000455592 494 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 AC072039.1-201ENST00000477611 581 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 AC104090.1-201ENST00000506341 1171 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 NDUFB4P2-201ENST00000509515 391 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN6P56747 LRRC6P1-201ENST00000532188 885 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.18□□□□□ -2.06
CLDN6P56747 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN6P56747 AL132657.2-201ENST00000564417 358 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.18□□□□□ -2.06
CLDN6P56747 HMGB1P24-202ENST00000615653 685 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN6P56747 HSPA8P4-201ENST00000511877 1920 ntBASIC2.18□□□□□ -2.06
CLDN6P56747 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CLDN6P56747 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN6P56747 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 Y_RNA.4-201ENST00000362333 112 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 RNU6-884P-201ENST00000363889 107 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 SNORA80E-201ENST00000384744 137 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN6P56747 AL590084.1-201ENST00000407885 387 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 Z75741.2-201ENST00000417272 1167 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 HMGB1P49-201ENST00000418882 569 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 CYCSP49-201ENST00000420810 319 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN6P56747 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN6P56747 AC021382.1-201ENST00000483523 359 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC079203.1-201ENST00000487972 404 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 RPL37P25-201ENST00000507308 276 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC112198.4-201ENST00000515450 351 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 SCARNA11.3-201ENST00000517276 130 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN6P56747 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.17□□□□□ -2.06
CLDN6P56747 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN6P56747 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN6P56747 AC005832.3-201ENST00000537929 631 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC092451.2-201ENST00000538746 658 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN6P56747 AP001004.1-201ENST00000582468 324 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AL353997.4-201ENST00000586196 166 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC068620.3-201ENST00000602749 560 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AL139344.1-201ENST00000605228 195 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC103710.2-201ENST00000609912 942 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC010133.1-201ENST00000615809 842 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC009268.2-201ENST00000621925 457 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
CLDN6P56747 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN6P56747 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
CLDN6P56747 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 RNU6-114P-201ENST00000384704 105 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 SNORA40.2-201ENST00000390847 128 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.16□□□□□ -2.06
CLDN6P56747 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN6P56747 RPL23AP29-201ENST00000397284 453 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 MIR888-201ENST00000401186 77 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN6P56747 RNU6-516P-201ENST00000411381 104 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN6P56747 AL451054.2-201ENST00000420896 202 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 MTCO3P30-201ENST00000426425 670 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN6P56747 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN6P56747 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN6P56747 AC233279.1-201ENST00000455300 423 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 RNU6-150P-201ENST00000516237 95 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 AP003497.1-201ENST00000528472 562 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN6P56747 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN6P56747 TPMTP1-201ENST00000592307 737 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 RPL21P136-201ENST00000605378 396 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC112220.2-201ENST00000605513 533 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AL158163.2-201ENST00000619110 700 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC010378.1-201ENST00000619270 362 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AC104985.3-201ENST00000623479 597 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AP003476.1-201ENST00000623984 516 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.16□□□□□ -2.06
CLDN6P56747 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 PABPC1P9-201ENST00000426076 1612 ntBASIC2.16□□□□□ -2.06
CLDN6P56747 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN6P56747 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CLDN6P56747 AC009902.3-201ENST00000606235 2172 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 MIR21-201ENST00000362134 72 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 RNA5SP88-201ENST00000365560 109 ntBASIC2.15□□□□□ -2.07
CLDN6P56747 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms