Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH11P55287 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH11P55287 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH11P55287 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CDH11P55287 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH11P55287 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH11P55287 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH11P55287 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH11P55287 RNU5A-1-201ENST00000362698 116 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNU6-1097P-201ENST00000363586 107 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNU6-960P-201ENST00000364056 120 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
CDH11P55287 DEFB109C-201ENST00000382575 264 ntBASIC3.02□□□□□ -1.93
CDH11P55287 DEFB109B-201ENST00000382656 264 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNU6-14P-201ENST00000384630 106 ntBASIC3.02□□□□□ -1.93
CDH11P55287 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AL139397.2-201ENST00000404529 772 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AP000567.1-201ENST00000406413 156 ntBASIC3.02□□□□□ -1.93
CDH11P55287 UBE2V1P10-201ENST00000414685 269 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AL451054.2-201ENST00000420896 202 ntBASIC3.02□□□□□ -1.93
CDH11P55287 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RPS3AP44-201ENST00000425466 790 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC008850.1-201ENST00000427546 362 ntBASIC3.02□□□□□ -1.93
CDH11P55287 Z99127.3-201ENST00000448158 395 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RBMY2UP-201ENST00000453474 324 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RPS3AP14-201ENST00000483907 780 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC007182.2-201ENST00000489251 402 ntBASIC3.02□□□□□ -1.93
CDH11P55287 HSPD1P15-201ENST00000505573 1122 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC026427.2-201ENST00000506228 536 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
CDH11P55287 SNORA31.3-201ENST00000516029 96 ntBASIC3.02□□□□□ -1.93
CDH11P55287 RNU6-506P-201ENST00000516553 94 ntBASIC3.02□□□□□ -1.93
CDH11P55287 MTND1P5-201ENST00000517906 940 ntBASIC3.02□□□□□ -1.93
CDH11P55287 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH11P55287 AC093012.1-202ENST00000549403 582 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC124947.2-202ENST00000552735 133 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH11P55287 MIR5195-201ENST00000583555 115 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 AF250324.2-201ENST00000608299 610 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC092954.2-201ENST00000609103 430 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC017083.3-201ENST00000609955 700 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AL110115.1-201ENST00000614396 364 ntBASIC3.02□□□□□ -1.93
CDH11P55287 SNORD39.4-201ENST00000620099 78 ntBASIC3.02□□□□□ -1.93
CDH11P55287 AC009161.2-201ENST00000624626 138 ntBASIC3.02□□□□□ -1.93
CDH11P55287 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CDH11P55287 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH11P55287 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH11P55287 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH11P55287 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.02□□□□□ -1.93
CDH11P55287 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH11P55287 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RNA5SP197-201ENST00000363357 119 ntBASIC3.01□□□□□ -1.93
CDH11P55287 DYNLT3P1-201ENST00000378574 347 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RNU6-517P-201ENST00000384362 110 ntBASIC3.01□□□□□ -1.93
CDH11P55287 CALM2P3-201ENST00000400429 449 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RN7SKP140-201ENST00000411196 284 ntBASIC3.01□□□□□ -1.93
CDH11P55287 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.01□□□□□ -1.93
CDH11P55287 ZNF90P2-204ENST00000419323 1075 ntBASIC3.01□□□□□ -1.93
CDH11P55287 YPEL5P1-201ENST00000419731 367 ntBASIC3.01□□□□□ -1.93
CDH11P55287 UBE2D3P2-201ENST00000424409 445 ntBASIC3.01□□□□□ -1.93
CDH11P55287 MED13P1-201ENST00000428342 171 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 C8orf59P1-201ENST00000429930 303 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RPL23AP30-201ENST00000432419 501 ntBASIC3.01□□□□□ -1.93
CDH11P55287 FCF1P1-201ENST00000432690 571 ntBASIC3.01□□□□□ -1.93
CDH11P55287 GPR143P-201ENST00000434155 205 ntBASIC3.01□□□□□ -1.93
CDH11P55287 MTND1P4-201ENST00000435196 415 ntBASIC3.01□□□□□ -1.93
CDH11P55287 CST9LP2-201ENST00000437612 320 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH11P55287 AC091179.1-201ENST00000461606 579 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC008155.2-201ENST00000464337 397 ntBASIC3.01□□□□□ -1.93
CDH11P55287 SRRM1P2-201ENST00000464531 1192 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC019235.1-201ENST00000503847 207 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
CDH11P55287 SCARNA15.2-201ENST00000516409 127 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RNU6-1092P-201ENST00000516955 87 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RN7SKP258-201ENST00000517151 304 ntBASIC3.01□□□□□ -1.93
CDH11P55287 RNA5SP380-201ENST00000517190 98 ntBASIC3.01□□□□□ -1.93
CDH11P55287 SCARNA20.6-201ENST00000517251 106 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AP006587.4-201ENST00000526053 529 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 AC015917.1-201ENST00000579654 510 ntBASIC3.01□□□□□ -1.93
CDH11P55287 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 AC106900.2-201ENST00000604994 317 ntBASIC3.01□□□□□ -1.93
CDH11P55287 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms