Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 AC027290.2-201ENST00000623210 18662 ntBASIC4.6□□□□□ -1.67
PMS1P54277 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 RNU6-1115P-201ENST00000362490 106 ntBASIC4.6□□□□□ -1.67
PMS1P54277 Y_RNA.148-201ENST00000363557 117 ntBASIC4.6□□□□□ -1.67
PMS1P54277 SNORD74.4-201ENST00000364129 80 ntBASIC4.6□□□□□ -1.67
PMS1P54277 Y_RNA.594-201ENST00000410373 140 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.6□□□□□ -1.67
PMS1P54277 AC010469.1-201ENST00000463864 576 ntBASIC4.6□□□□□ -1.67
PMS1P54277 RN7SL459P-201ENST00000481078 302 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AF213884.1-201ENST00000488102 463 ntBASIC4.6□□□□□ -1.67
PMS1P54277 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.6□□□□□ -1.67
PMS1P54277 AC009901.1-201ENST00000506703 541 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AC017037.1-201ENST00000508460 471 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AL592156.1-201ENST00000508758 304 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AC026782.1-201ENST00000512952 449 ntBASIC4.6□□□□□ -1.67
PMS1P54277 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.6□□□□□ -1.67
PMS1P54277 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.6□□□□□ -1.67
PMS1P54277 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.6□□□□□ -1.67
PMS1P54277 AL139395.1-201ENST00000603662 160 ntBASIC4.6□□□□□ -1.67
PMS1P54277 AC018462.2-201ENST00000605375 395 ntBASIC4.6□□□□□ -1.67
PMS1P54277 PLCE1P1-201ENST00000622094 305 ntBASIC4.6□□□□□ -1.67
PMS1P54277 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.6□□□□□ -1.67
PMS1P54277 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.6□□□□□ -1.67
PMS1P54277 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PMS1P54277 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PMS1P54277 Y_RNA.5-201ENST00000362334 102 ntBASIC4.59□□□□□ -1.67
PMS1P54277 RNU6-371P-201ENST00000364283 108 ntBASIC4.59□□□□□ -1.67
PMS1P54277 RNU6-1303P-201ENST00000364841 107 ntBASIC4.59□□□□□ -1.67
PMS1P54277 RNA5SP235-201ENST00000365411 114 ntBASIC4.59□□□□□ -1.67
PMS1P54277 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PMS1P54277 Y_RNA.473-201ENST00000384333 102 ntBASIC4.59□□□□□ -1.67
PMS1P54277 MIR585-201ENST00000384887 94 ntBASIC4.59□□□□□ -1.67
PMS1P54277 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PMS1P54277 RNA5SP306-201ENST00000411087 107 ntBASIC4.59□□□□□ -1.67
PMS1P54277 RNU6-293P-201ENST00000411259 106 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.59□□□□□ -1.67
PMS1P54277 MTCO1P39-201ENST00000426148 480 ntBASIC4.59□□□□□ -1.67
PMS1P54277 FTH1P6-201ENST00000430768 320 ntBASIC4.59□□□□□ -1.67
PMS1P54277 MARK2P15-201ENST00000432204 2186 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC236972.1-201ENST00000433225 199 ntBASIC4.59□□□□□ -1.67
PMS1P54277 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.59□□□□□ -1.67
PMS1P54277 HIGD1AP11-201ENST00000438361 280 ntBASIC4.59□□□□□ -1.67
PMS1P54277 HSFY6P-201ENST00000445573 403 ntBASIC4.59□□□□□ -1.67
PMS1P54277 snoU13.1-201ENST00000459157 104 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC011276.1-201ENST00000469688 323 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC084198.1-201ENST00000477747 402 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.59□□□□□ -1.67
PMS1P54277 MLLT10P2-201ENST00000506434 249 ntBASIC4.59□□□□□ -1.67
PMS1P54277 Y_RNA.670-201ENST00000516255 105 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC069113.1-201ENST00000517763 267 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.59□□□□□ -1.67
PMS1P54277 SNRPGP16-201ENST00000533275 226 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.59□□□□□ -1.67
PMS1P54277 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.59□□□□□ -1.67
PMS1P54277 FAM60BP-201ENST00000578364 658 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AC090337.1-201ENST00000579651 2074 ntBASIC4.59□□□□□ -1.67
PMS1P54277 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
PMS1P54277 AC005255.1-201ENST00000593748 216 ntBASIC4.59□□□□□ -1.67
PMS1P54277 AL121655.1-201ENST00000605811 308 ntBASIC4.59□□□□□ -1.67
PMS1P54277 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.59□□□□□ -1.67
PMS1P54277 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
PMS1P54277 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PMS1P54277 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
PMS1P54277 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PMS1P54277 AC007390.2-201ENST00000606229 3803 ntBASIC4.59□□□□□ -1.68
PMS1P54277 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
PMS1P54277 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PMS1P54277 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PMS1P54277 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PMS1P54277 AC138393.1-203ENST00000327086 343 ntBASIC4.58□□□□□ -1.68
PMS1P54277 SNORD62.1-201ENST00000362541 86 ntBASIC4.58□□□□□ -1.68
PMS1P54277 RNU6-463P-201ENST00000384340 107 ntBASIC4.58□□□□□ -1.68
PMS1P54277 RNU6-1105P-201ENST00000384774 107 ntBASIC4.58□□□□□ -1.68
PMS1P54277 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.58□□□□□ -1.68
PMS1P54277 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.58□□□□□ -1.68
PMS1P54277 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.58□□□□□ -1.68
PMS1P54277 RNU7-138P-201ENST00000459479 64 ntBASIC4.58□□□□□ -1.68
PMS1P54277 RPS29P22-201ENST00000472363 168 ntBASIC4.58□□□□□ -1.68
PMS1P54277 RPS15AP34-201ENST00000487776 387 ntBASIC4.58□□□□□ -1.68
PMS1P54277 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.58□□□□□ -1.68
PMS1P54277 Y_RNA.661-201ENST00000516003 99 ntBASIC4.58□□□□□ -1.68
PMS1P54277 AP004371.1-201ENST00000525240 214 ntBASIC4.58□□□□□ -1.68
PMS1P54277 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.58□□□□□ -1.68
PMS1P54277 AC022655.2-201ENST00000577280 318 ntBASIC4.58□□□□□ -1.68
PMS1P54277 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.58□□□□□ -1.68
PMS1P54277 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms