Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX1P47902 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX1P47902 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX1P47902 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX1P47902 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
CDX1P47902 NCAPGP2-201ENST00000557911 754 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
CDX1P47902 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX1P47902 BNIP3P22-201ENST00000593399 556 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.79□□□□□ -1.96
CDX1P47902 AC174048.1-201ENST00000603389 144 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AC024220.1-201ENST00000603675 484 ntBASIC2.79□□□□□ -1.96
CDX1P47902 MIR98-201ENST00000606724 119 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AC130324.3-201ENST00000614165 542 ntBASIC2.79□□□□□ -1.96
CDX1P47902 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDX1P47902 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX1P47902 AC084757.4-201ENST00000616350 526 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AC022149.2-201ENST00000621061 203 ntBASIC2.79□□□□□ -1.96
CDX1P47902 AL357559.1-201ENST00000622228 274 ntBASIC2.79□□□□□ -1.96
CDX1P47902 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDX1P47902 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDX1P47902 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CDX1P47902 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
CDX1P47902 CR848007.1-201ENST00000442354 1699 ntBASIC2.79□□□□□ -1.96
CDX1P47902 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX1P47902 AC068647.1-201ENST00000489539 2265 ntBASIC2.79□□□□□ -1.96
CDX1P47902 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDX1P47902 AC093831.2-201ENST00000624393 3427 ntBASIC2.78□□□□□ -1.96
CDX1P47902 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX1P47902 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
CDX1P47902 RNU6-641P-201ENST00000384006 107 ntBASIC2.78□□□□□ -1.96
CDX1P47902 SNORD116-1-201ENST00000384335 95 ntBASIC2.78□□□□□ -1.96
CDX1P47902 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDX1P47902 RNU2-39P-201ENST00000410604 198 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC007899.1-201ENST00000412776 775 ntBASIC2.78□□□□□ -1.96
CDX1P47902 BX295541.1-201ENST00000417774 250 ntBASIC2.78□□□□□ -1.96
CDX1P47902 C1DP2-201ENST00000418167 426 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX1P47902 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX1P47902 AL645937.1-202ENST00000421799 937 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX1P47902 AL365496.1-201ENST00000426885 215 ntBASIC2.78□□□□□ -1.96
CDX1P47902 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC073063.1-201ENST00000434352 607 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX1P47902 MTCO2P16-201ENST00000436962 677 ntBASIC2.78□□□□□ -1.96
CDX1P47902 RPS24P13-201ENST00000442520 397 ntBASIC2.78□□□□□ -1.96
CDX1P47902 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX1P47902 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX1P47902 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX1P47902 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX1P47902 RN7SL293P-201ENST00000481765 281 ntBASIC2.78□□□□□ -1.96
CDX1P47902 RPS27P26-201ENST00000494583 239 ntBASIC2.78□□□□□ -1.96
CDX1P47902 SUMO2P6-201ENST00000505273 288 ntBASIC2.78□□□□□ -1.96
CDX1P47902 Y_RNA.689-201ENST00000516589 107 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AP006245.1-201ENST00000522549 120 ntBASIC2.78□□□□□ -1.96
CDX1P47902 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX1P47902 AC010653.1-201ENST00000571108 881 ntBASIC2.78□□□□□ -1.96
CDX1P47902 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
CDX1P47902 AC078899.3-201ENST00000599065 212 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC006077.1-201ENST00000604746 343 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC135507.1-201ENST00000607214 561 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC022893.3-201ENST00000607665 437 ntBASIC2.78□□□□□ -1.96
CDX1P47902 DUSP12P1-201ENST00000612874 516 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AL512643.1-201ENST00000635735 524 ntBASIC2.78□□□□□ -1.96
CDX1P47902 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX1P47902 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDX1P47902 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDX1P47902 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX1P47902 AP003122.5-201ENST00000527668 3766 ntBASIC2.78□□□□□ -1.96
CDX1P47902 AC093010.3-201ENST00000570269 15214 ntBASIC2.77□□□□□ -1.97
CDX1P47902 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CDX1P47902 AC008669.1-201ENST00000565823 2178 ntBASIC2.77□□□□□ -1.97
CDX1P47902 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDX1P47902 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
CDX1P47902 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
CDX1P47902 AL049781.1-201ENST00000623195 3585 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNA5SP50-201ENST00000363731 107 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNA5SP72-201ENST00000364442 117 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNU6-169P-201ENST00000365336 107 ntBASIC2.77□□□□□ -1.97
CDX1P47902 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNU6-190P-201ENST00000384154 102 ntBASIC2.77□□□□□ -1.97
CDX1P47902 MIR558-201ENST00000384920 94 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNA5SP44-201ENST00000410446 133 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RNU6-248P-201ENST00000410720 107 ntBASIC2.77□□□□□ -1.97
CDX1P47902 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX1P47902 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX1P47902 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX1P47902 MED13P1-201ENST00000428342 171 ntBASIC2.77□□□□□ -1.97
CDX1P47902 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX1P47902 NDUFB1P1-201ENST00000435191 180 ntBASIC2.77□□□□□ -1.97
CDX1P47902 SETP8-201ENST00000435341 628 ntBASIC2.77□□□□□ -1.97
CDX1P47902 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX1P47902 KATNBL1P3-201ENST00000443475 909 ntBASIC2.77□□□□□ -1.97
CDX1P47902 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX1P47902 CYCSP35-201ENST00000451978 304 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RBMY2UP-201ENST00000453474 324 ntBASIC2.77□□□□□ -1.97
CDX1P47902 RPL36AP51-201ENST00000487216 318 ntBASIC2.77□□□□□ -1.97
CDX1P47902 AC010424.1-201ENST00000506336 297 ntBASIC2.77□□□□□ -1.97
CDX1P47902 AC117522.1-201ENST00000509821 380 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms