Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.97□□□□□ -1.77
COL15A1P39059 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.97□□□□□ -1.77
COL15A1P39059 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.97□□□□□ -1.77
COL15A1P39059 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL15A1P39059 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.97□□□□□ -1.77
COL15A1P39059 AL133153.1-201ENST00000557756 303 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC092325.1-201ENST00000566449 554 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.97□□□□□ -1.77
COL15A1P39059 Z84480.1-201ENST00000605131 311 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AL136363.1-201ENST00000605349 337 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC007014.2-201ENST00000615581 479 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC139792.3-201ENST00000623525 224 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 AC019226.1-201ENST00000625666 515 ntBASIC3.97□□□□□ -1.77
COL15A1P39059 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL15A1P39059 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
COL15A1P39059 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.96□□□□□ -1.78
COL15A1P39059 RNU1-75P-201ENST00000347264 129 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 Y_RNA.453-201ENST00000384223 109 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 CIR1P3-201ENST00000405137 479 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 EEF1A1P41-201ENST00000414667 207 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.96□□□□□ -1.78
COL15A1P39059 MTCO3P12-201ENST00000416718 547 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.96□□□□□ -1.78
COL15A1P39059 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.96□□□□□ -1.78
COL15A1P39059 RPL9P32-201ENST00000464118 620 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AC092451.1-201ENST00000480211 153 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AC135721.1-201ENST00000497954 479 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 VN1R104P-201ENST00000505115 1009 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.96□□□□□ -1.78
COL15A1P39059 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.96□□□□□ -1.78
COL15A1P39059 HMGB1P33-201ENST00000563485 527 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AC068135.2-201ENST00000569293 1028 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.96□□□□□ -1.78
COL15A1P39059 SNRPGP15-201ENST00000600149 222 ntBASIC3.96□□□□□ -1.78
COL15A1P39059 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.96□□□□□ -1.78
COL15A1P39059 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL15A1P39059 AC000403.1-201ENST00000613696 3585 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 RNU5E-8P-201ENST00000363502 116 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 RNU6-1155P-201ENST00000363554 107 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 RNU6-169P-201ENST00000365336 107 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 Y_RNA.402-201ENST00000383972 102 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 Y_RNA.450-201ENST00000384198 113 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.95□□□□□ -1.78
COL15A1P39059 GPR143P-201ENST00000434155 205 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.95□□□□□ -1.78
COL15A1P39059 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.95□□□□□ -1.78
COL15A1P39059 KC877373.1-201ENST00000479066 408 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 MTAPP1-201ENST00000489154 819 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.95□□□□□ -1.78
COL15A1P39059 AC068305.1-201ENST00000497406 726 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AC019235.1-201ENST00000503847 207 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
COL15A1P39059 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL15A1P39059 RNU1-143P-201ENST00000516296 146 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 RNA5SP309-201ENST00000516670 106 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 RNU6-1220P-201ENST00000517126 108 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 OR5AQ1P-201ENST00000527596 927 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 DEFB108D-201ENST00000527787 222 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AL512360.1-201ENST00000555346 234 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 GTF3AP2-201ENST00000557014 266 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.95□□□□□ -1.78
COL15A1P39059 SNORA59B-202ENST00000578183 701 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.95□□□□□ -1.78
COL15A1P39059 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.95□□□□□ -1.78
COL15A1P39059 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.95□□□□□ -1.78
COL15A1P39059 XIAPP1-201ENST00000603162 600 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AL391646.1-201ENST00000603860 190 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 U1.23-201ENST00000610293 146 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 RNU1-68P-201ENST00000615382 146 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AL603758.1-201ENST00000618654 241 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 U1.39-201ENST00000621562 146 ntBASIC3.95□□□□□ -1.78
COL15A1P39059 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.95□□□□□ -1.78
COL15A1P39059 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.95□□□□□ -1.78
COL15A1P39059 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL15A1P39059 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL15A1P39059 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.94□□□□□ -1.78
COL15A1P39059 RNU6-223P-201ENST00000362830 107 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 U3.11-201ENST00000364476 212 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 MIR135A2-201ENST00000384854 100 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL15A1P39059 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.94□□□□□ -1.78
COL15A1P39059 RNU4-65P-201ENST00000410473 140 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.94□□□□□ -1.78
COL15A1P39059 UBE2FP1-201ENST00000416536 447 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.94□□□□□ -1.78
COL15A1P39059 MTCO2P19-201ENST00000427513 598 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 RPS12P18-201ENST00000442381 270 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 AL135938.1-201ENST00000443141 297 ntBASIC3.94□□□□□ -1.78
COL15A1P39059 RPL23AP20-201ENST00000447965 421 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms