Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC027309.3-201ENST00000623419 351 ntBASIC3.34□□□□□ -1.87
HOXC8P31273 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC8P31273 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC8P31273 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
HOXC8P31273 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.34□□□□□ -1.88
HOXC8P31273 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
HOXC8P31273 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
HOXC8P31273 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HOXC8P31273 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC8P31273 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC8P31273 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC8P31273 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC8P31273 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC8P31273 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC8P31273 RNU6-517P-201ENST00000384362 110 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 MIR514A1-201ENST00000385133 98 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 RNU6-754P-201ENST00000391166 107 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 ELOCP17-201ENST00000414751 326 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HOXC8P31273 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC8P31273 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC093156.1-201ENST00000440382 670 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC8P31273 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXC8P31273 NDUFB4P2-201ENST00000509515 391 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 RN7SKP298-201ENST00000515950 94 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 RN7SKP60-201ENST00000516985 239 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 AC009063.1-201ENST00000563342 702 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 MIR3609-201ENST00000582661 80 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC107304.1-201ENST00000604229 296 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC131902.3-201ENST00000611767 581 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 AC013476.2-201ENST00000614456 459 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXC8P31273 AC009902.3-201ENST00000606235 2172 ntBASIC3.33□□□□□ -1.88
HOXC8P31273 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HOXC8P31273 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
HOXC8P31273 SNORA23-201ENST00000365128 182 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
HOXC8P31273 RNU6-851P-201ENST00000384565 107 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC110754.1-201ENST00000399740 601 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 RNU6-248P-201ENST00000410720 107 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AL359704.1-201ENST00000411586 781 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC8P31273 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXC8P31273 AP1S2P1-201ENST00000457344 379 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 LARP1BP2-201ENST00000486594 519 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC138853.1-201ENST00000503549 823 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 RPL37P25-201ENST00000507308 276 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC006445.2-201ENST00000510061 472 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AF213884.2-201ENST00000510417 903 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 SCARNA15.2-201ENST00000516409 127 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC022878.1-201ENST00000530684 149 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC124947.2-202ENST00000552735 133 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 OR4T1P-201ENST00000554933 911 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AL355836.1-201ENST00000555951 870 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 GTF3AP2-201ENST00000557014 266 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AC137800.2-201ENST00000574375 120 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 MIR3913-1-201ENST00000577744 102 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC8P31273 AC009977.1-201ENST00000586015 570 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 ELOCP29-201ENST00000588193 334 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXC8P31273 AL603758.1-201ENST00000618654 241 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 CCT4P2-201ENST00000233836 1548 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HOXC8P31273 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.32□□□□□ -1.88
HOXC8P31273 OR4G2P-202ENST00000641004 1759 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC8P31273 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC8P31273 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HOXC8P31273 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXC8P31273 RPS3AP36-201ENST00000398190 775 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 RPS20P2-201ENST00000402520 389 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 Y_RNA.608-201ENST00000410647 95 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC8P31273 UBE2V1P10-201ENST00000414685 269 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXC8P31273 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXC8P31273 NDUFB4P7-201ENST00000423198 363 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXC8P31273 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 MTND1P4-201ENST00000435196 415 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 RPL22P17-201ENST00000438729 315 ntBASIC3.31□□□□□ -1.88
HOXC8P31273 FAM103A2P-201ENST00000444122 354 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms