Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA11P31270 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA11P31270 RNY3P3-201ENST00000363816 102 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 Y_RNA.234-201ENST00000364409 97 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 RNU6-877P-201ENST00000383868 107 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 RNU6-1074P-201ENST00000383995 104 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 RNU6-876P-201ENST00000391295 104 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 MRPL42P2-201ENST00000403169 426 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 RNU4-47P-201ENST00000410876 114 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 DUTP6-201ENST00000425573 462 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA11P31270 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA11P31270 SNRPEP4-201ENST00000435815 279 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC098614.3-201ENST00000438957 440 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA11P31270 AC092001.1-201ENST00000453012 261 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 RNU6-1281P-201ENST00000516223 105 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXA11P31270 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXA11P31270 OR4P1P-201ENST00000530808 1136 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AL356432.3-201ENST00000568952 465 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA11P31270 NRBF2P5-201ENST00000603087 788 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AC121334.2-201ENST00000605387 271 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AL158211.4-201ENST00000606988 584 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 AL356585.4-201ENST00000623078 1229 ntBASIC3.59□□□□□ -1.83
HOXA11P31270 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXA11P31270 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXA11P31270 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
HOXA11P31270 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HOXA11P31270 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
HOXA11P31270 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXA11P31270 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 AC009902.3-201ENST00000606235 2172 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 RNU6-525P-201ENST00000363685 104 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 RNU6-169P-201ENST00000365336 107 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AL356421.1-201ENST00000403255 413 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA11P31270 MTATP6P18-201ENST00000417994 673 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 AL353705.1-201ENST00000433468 480 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC006028.1-201ENST00000438379 402 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 FDX1P2-201ENST00000450769 375 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 RPS29P2-201ENST00000479278 136 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 RPL39P36-201ENST00000490784 156 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC079382.1-201ENST00000493346 557 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 HMGN1P12-201ENST00000499125 195 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC008628.2-201ENST00000502605 298 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 RNU6-835P-201ENST00000516974 104 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA11P31270 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 AP003497.1-201ENST00000528472 562 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA11P31270 SETP2-201ENST00000553886 926 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC055876.1-202ENST00000567053 138 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXA11P31270 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 MIR98-201ENST00000606724 119 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXA11P31270 AL391813.2-201ENST00000609113 322 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AL161734.1-201ENST00000609720 557 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXA11P31270 AL110115.1-201ENST00000614396 364 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AL355810.1-201ENST00000614629 552 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC068831.7-201ENST00000616954 363 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 AC009161.2-201ENST00000624626 138 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 MTND4P12-201ENST00000498999 1377 ntBASIC3.58□□□□□ -1.84
HOXA11P31270 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXA11P31270 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXA11P31270 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA11P31270 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXA11P31270 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HOXA11P31270 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXA11P31270 RNU6-451P-201ENST00000362921 107 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 RNU6-1120P-201ENST00000362988 108 ntBASIC3.57□□□□□ -1.84
HOXA11P31270 RNU6-1097P-201ENST00000363586 107 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms