Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
RXRBP28702 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 AC130650.2-201ENST00000618736 2403 ntBASIC5.28□□□□□ -1.56
RXRBP28702 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-97P-201ENST00000363387 104 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-266P-201ENST00000364225 107 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-99P-201ENST00000364721 107 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNA5SP51-201ENST00000364750 119 ntBASIC5.28□□□□□ -1.56
RXRBP28702 SNORD115-7-201ENST00000365306 82 ntBASIC5.28□□□□□ -1.56
RXRBP28702 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-1062P-201ENST00000383908 107 ntBASIC5.28□□□□□ -1.56
RXRBP28702 Y_RNA.489-201ENST00000384410 101 ntBASIC5.28□□□□□ -1.56
RXRBP28702 SNORA75.6-201ENST00000391318 127 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AL031121.1-201ENST00000406553 254 ntBASIC5.28□□□□□ -1.56
RXRBP28702 MIR1251-201ENST00000408552 70 ntBASIC5.28□□□□□ -1.56
RXRBP28702 MIR1179-201ENST00000408703 91 ntBASIC5.28□□□□□ -1.56
RXRBP28702 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC005326.1-201ENST00000429197 123 ntBASIC5.28□□□□□ -1.56
RXRBP28702 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.28□□□□□ -1.56
RXRBP28702 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 HMGB3P17-201ENST00000504195 649 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC116655.1-201ENST00000508324 901 ntBASIC5.28□□□□□ -1.56
RXRBP28702 HIGD1AP13-201ENST00000509878 289 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-408P-201ENST00000515910 100 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNA5SP249-201ENST00000516127 99 ntBASIC5.28□□□□□ -1.56
RXRBP28702 RNU6-1016P-201ENST00000516689 94 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 AC124068.1-201ENST00000563131 678 ntBASIC5.28□□□□□ -1.56
RXRBP28702 MIR5187-201ENST00000583479 76 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.28□□□□□ -1.56
RXRBP28702 AC244505.7-201ENST00000599675 272 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC103705.1-201ENST00000619013 241 ntBASIC5.28□□□□□ -1.56
RXRBP28702 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RXRBP28702 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.28□□□□□ -1.56
RXRBP28702 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RXRBP28702 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RXRBP28702 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.27□□□□□ -1.57
RXRBP28702 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.27□□□□□ -1.57
RXRBP28702 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.27□□□□□ -1.57
RXRBP28702 Y_RNA.473-201ENST00000384333 102 ntBASIC5.27□□□□□ -1.57
RXRBP28702 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.27□□□□□ -1.57
RXRBP28702 AC073063.1-201ENST00000434352 607 ntBASIC5.27□□□□□ -1.57
RXRBP28702 RPL23AP89-201ENST00000439324 255 ntBASIC5.27□□□□□ -1.57
RXRBP28702 AC104073.1-201ENST00000451988 151 ntBASIC5.27□□□□□ -1.57
RXRBP28702 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.27□□□□□ -1.57
RXRBP28702 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.27□□□□□ -1.57
RXRBP28702 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.27□□□□□ -1.57
RXRBP28702 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.27□□□□□ -1.57
RXRBP28702 AC022882.1-201ENST00000532142 501 ntBASIC5.27□□□□□ -1.57
RXRBP28702 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC5.27□□□□□ -1.57
RXRBP28702 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.27□□□□□ -1.57
RXRBP28702 HMGB2P1-201ENST00000591146 634 ntBASIC5.27□□□□□ -1.57
RXRBP28702 AC123786.2-201ENST00000603459 275 ntBASIC5.27□□□□□ -1.57
RXRBP28702 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.27□□□□□ -1.57
RXRBP28702 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RXRBP28702 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RXRBP28702 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 AC005592.1-201ENST00000566527 1640 ntBASIC5.26□□□□□ -1.57
RXRBP28702 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.26□□□□□ -1.57
RXRBP28702 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.26□□□□□ -1.57
RXRBP28702 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.26□□□□□ -1.57
RXRBP28702 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 RNU6-472P-201ENST00000384299 107 ntBASIC5.26□□□□□ -1.57
RXRBP28702 MTCO3P45-201ENST00000443036 613 ntBASIC5.26□□□□□ -1.57
RXRBP28702 RAC1P7-201ENST00000445367 377 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC243772.1-201ENST00000451620 410 ntBASIC5.26□□□□□ -1.57
RXRBP28702 snoU13.8-201ENST00000458890 104 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC025518.1-201ENST00000479856 347 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC068305.1-201ENST00000497406 726 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC026784.1-201ENST00000507986 352 ntBASIC5.26□□□□□ -1.57
RXRBP28702 HMGB3P16-201ENST00000508037 287 ntBASIC5.26□□□□□ -1.57
RXRBP28702 Y_RNA.670-201ENST00000516255 105 ntBASIC5.26□□□□□ -1.57
RXRBP28702 RNU7-51P-201ENST00000516560 62 ntBASIC5.26□□□□□ -1.57
RXRBP28702 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RXRBP28702 YPEL5P3-201ENST00000547227 352 ntBASIC5.26□□□□□ -1.57
RXRBP28702 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.26□□□□□ -1.57
RXRBP28702 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.26□□□□□ -1.57
RXRBP28702 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.26□□□□□ -1.57
RXRBP28702 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms