Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC073901.1-201ENST00000462471 408 ntBASIC5.38□□□□□ -1.55
VARSP26640 AC007686.1-201ENST00000488511 463 ntBASIC5.38□□□□□ -1.55
VARSP26640 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.38□□□□□ -1.55
VARSP26640 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.38□□□□□ -1.55
VARSP26640 RN7SL591P-201ENST00000496150 292 ntBASIC5.38□□□□□ -1.55
VARSP26640 RNU6-426P-201ENST00000516464 97 ntBASIC5.38□□□□□ -1.55
VARSP26640 RNU6-919P-201ENST00000516731 104 ntBASIC5.38□□□□□ -1.55
VARSP26640 AP005660.1-201ENST00000522972 293 ntBASIC5.38□□□□□ -1.55
VARSP26640 BNIP3P5-201ENST00000562290 498 ntBASIC5.38□□□□□ -1.55
VARSP26640 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.38□□□□□ -1.55
VARSP26640 MIR4700-201ENST00000578311 74 ntBASIC5.38□□□□□ -1.55
VARSP26640 AC067852.4-201ENST00000590314 478 ntBASIC5.38□□□□□ -1.55
VARSP26640 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 AC005828.6-201ENST00000606610 232 ntBASIC5.38□□□□□ -1.55
VARSP26640 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 AC025574.2-201ENST00000615621 514 ntBASIC5.38□□□□□ -1.55
VARSP26640 AL360181.4-201ENST00000621752 134 ntBASIC5.38□□□□□ -1.55
VARSP26640 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
VARSP26640 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.38□□□□□ -1.55
VARSP26640 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VARSP26640 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VARSP26640 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.37□□□□□ -1.55
VARSP26640 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
VARSP26640 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
VARSP26640 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 RNU6-153P-201ENST00000364422 104 ntBASIC5.37□□□□□ -1.55
VARSP26640 Y_RNA.262-201ENST00000364641 102 ntBASIC5.37□□□□□ -1.55
VARSP26640 SNORA36C-201ENST00000384289 132 ntBASIC5.37□□□□□ -1.55
VARSP26640 RNU6-882P-201ENST00000391025 103 ntBASIC5.37□□□□□ -1.55
VARSP26640 SNORA46.1-201ENST00000391069 153 ntBASIC5.37□□□□□ -1.55
VARSP26640 SNORD12B-201ENST00000410433 91 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC073465.2-201ENST00000440938 498 ntBASIC5.37□□□□□ -1.55
VARSP26640 UQCRBP2-201ENST00000447827 297 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC087588.1-201ENST00000462203 316 ntBASIC5.37□□□□□ -1.55
VARSP26640 RN7SL583P-201ENST00000475692 287 ntBASIC5.37□□□□□ -1.55
VARSP26640 AL160314.1-201ENST00000490836 438 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC104164.2-201ENST00000496953 495 ntBASIC5.37□□□□□ -1.55
VARSP26640 RNA5SP272-201ENST00000516095 111 ntBASIC5.37□□□□□ -1.55
VARSP26640 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.37□□□□□ -1.55
VARSP26640 AL390726.5-202ENST00000564800 256 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC233702.9-201ENST00000581528 203 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC010928.2-201ENST00000588017 287 ntBASIC5.37□□□□□ -1.55
VARSP26640 RPL23AP88-201ENST00000605759 454 ntBASIC5.37□□□□□ -1.55
VARSP26640 MIR7155-201ENST00000615925 56 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC118658.2-201ENST00000618697 459 ntBASIC5.37□□□□□ -1.55
VARSP26640 AC099506.2-201ENST00000623074 221 ntBASIC5.37□□□□□ -1.55
VARSP26640 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
VARSP26640 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
VARSP26640 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VARSP26640 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VARSP26640 AC022893.2-201ENST00000564832 3296 ntBASIC5.36□□□□□ -1.55
VARSP26640 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VARSP26640 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 RNU5A-1-201ENST00000362698 116 ntBASIC5.36□□□□□ -1.55
VARSP26640 MIR223-201ENST00000385204 110 ntBASIC5.36□□□□□ -1.55
VARSP26640 RNU6-257P-201ENST00000410238 98 ntBASIC5.36□□□□□ -1.55
VARSP26640 AL513331.1-201ENST00000411908 397 ntBASIC5.36□□□□□ -1.55
VARSP26640 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.36□□□□□ -1.55
VARSP26640 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.36□□□□□ -1.55
VARSP26640 AC009296.1-201ENST00000443146 155 ntBASIC5.36□□□□□ -1.55
VARSP26640 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.36□□□□□ -1.55
VARSP26640 AC114982.1-201ENST00000469402 321 ntBASIC5.36□□□□□ -1.55
VARSP26640 COPS8P2-201ENST00000473228 627 ntBASIC5.36□□□□□ -1.55
VARSP26640 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.36□□□□□ -1.55
VARSP26640 RNU6-377P-201ENST00000515965 102 ntBASIC5.36□□□□□ -1.55
VARSP26640 Y_RNA.719-201ENST00000517156 106 ntBASIC5.36□□□□□ -1.55
VARSP26640 AC084851.1-201ENST00000529105 249 ntBASIC5.36□□□□□ -1.55
VARSP26640 MRPS21P7-201ENST00000566937 238 ntBASIC5.36□□□□□ -1.55
VARSP26640 MIR1269B-201ENST00000580405 75 ntBASIC5.36□□□□□ -1.55
VARSP26640 MIR4423-201ENST00000580922 80 ntBASIC5.36□□□□□ -1.55
VARSP26640 MIR7853-201ENST00000584820 132 ntBASIC5.36□□□□□ -1.55
VARSP26640 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.36□□□□□ -1.55
VARSP26640 IMMP1LP3-201ENST00000604197 224 ntBASIC5.36□□□□□ -1.55
VARSP26640 AC233981.2-201ENST00000611524 1614 ntBASIC5.36□□□□□ -1.55
VARSP26640 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VARSP26640 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 LINC01109-201ENST00000603837 3081 ntBASIC5.36□□□□□ -1.55
VARSP26640 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
VARSP26640 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.36□□□□□ -1.55
VARSP26640 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.36□□□□□ -1.55
VARSP26640 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.36□□□□□ -1.55
VARSP26640 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VARSP26640 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms