Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.9□□□□□ -1.79
CD40P25942 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CD40P25942 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.9□□□□□ -1.79
CD40P25942 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.9□□□□□ -1.79
CD40P25942 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.89□□□□□ -1.79
CD40P25942 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 AC007390.2-201ENST00000606229 3803 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC027290.2-201ENST00000623210 18662 ntBASIC3.89□□□□□ -1.79
CD40P25942 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CD40P25942 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 Y_RNA.151-201ENST00000363566 112 ntBASIC3.89□□□□□ -1.79
CD40P25942 Y_RNA.197-201ENST00000364004 102 ntBASIC3.89□□□□□ -1.79
CD40P25942 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CD40P25942 RNU6-140P-201ENST00000384566 108 ntBASIC3.89□□□□□ -1.79
CD40P25942 MIR10A-201ENST00000385043 110 ntBASIC3.89□□□□□ -1.79
CD40P25942 SNORA40C-201ENST00000391285 128 ntBASIC3.89□□□□□ -1.79
CD40P25942 MIR1271-201ENST00000408537 86 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC092047.1-201ENST00000424997 240 ntBASIC3.89□□□□□ -1.79
CD40P25942 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 AC091390.1-201ENST00000433904 331 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC012671.1-201ENST00000451912 203 ntBASIC3.89□□□□□ -1.79
CD40P25942 ANP32BP2-201ENST00000454525 545 ntBASIC3.89□□□□□ -1.79
CD40P25942 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.89□□□□□ -1.79
CD40P25942 RPS23P3-201ENST00000470993 430 ntBASIC3.89□□□□□ -1.79
CD40P25942 RPL7P42-201ENST00000481005 679 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC083829.1-201ENST00000503756 657 ntBASIC3.89□□□□□ -1.79
CD40P25942 HMGN1P11-201ENST00000508668 303 ntBASIC3.89□□□□□ -1.79
CD40P25942 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.89□□□□□ -1.79
CD40P25942 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 AC108043.1-201ENST00000512696 574 ntBASIC3.89□□□□□ -1.79
CD40P25942 ELOCP31-201ENST00000540463 467 ntBASIC3.89□□□□□ -1.79
CD40P25942 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.89□□□□□ -1.79
CD40P25942 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.89□□□□□ -1.79
CD40P25942 BPIFA4P-203ENST00000603168 689 ntBASIC3.89□□□□□ -1.79
CD40P25942 CYP2C61P-201ENST00000604072 290 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC091979.2-201ENST00000607514 214 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC020634.1-201ENST00000608701 549 ntBASIC3.89□□□□□ -1.79
CD40P25942 AC004825.2-201ENST00000616634 455 ntBASIC3.89□□□□□ -1.79
CD40P25942 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CD40P25942 AC099506.2-201ENST00000623074 221 ntBASIC3.89□□□□□ -1.79
CD40P25942 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CD40P25942 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.89□□□□□ -1.79
CD40P25942 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CD40P25942 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.89□□□□□ -1.79
CD40P25942 AC007823.1-201ENST00000569932 1566 ntBASIC3.89□□□□□ -1.79
CD40P25942 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.88□□□□□ -1.79
CD40P25942 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 FTLP6-201ENST00000355274 422 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-37P-201ENST00000362692 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-11P-201ENST00000364234 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-7-201ENST00000364784 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-8-201ENST00000365467 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CD40P25942 RNU6-25P-201ENST00000383873 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-1-201ENST00000383898 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 Y_RNA.404-201ENST00000383978 102 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-48P-201ENST00000384161 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-36P-201ENST00000384172 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-4P-201ENST00000384205 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-5P-201ENST00000384238 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-3P-201ENST00000384314 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-166P-201ENST00000384371 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-16P-201ENST00000384385 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-15P-201ENST00000384534 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-2-201ENST00000384627 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-29P-201ENST00000384637 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-9-201ENST00000384776 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-33P-201ENST00000384793 107 ntBASIC3.88□□□□□ -1.79
CD40P25942 Z99755.1-201ENST00000414048 380 ntBASIC3.88□□□□□ -1.79
CD40P25942 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 TOMM20P4-201ENST00000427861 435 ntBASIC3.88□□□□□ -1.79
CD40P25942 USP9YP30-201ENST00000430729 455 ntBASIC3.88□□□□□ -1.79
CD40P25942 AL627311.1-201ENST00000431514 115 ntBASIC3.88□□□□□ -1.79
CD40P25942 AC236972.1-201ENST00000433225 199 ntBASIC3.88□□□□□ -1.79
CD40P25942 NDUFB1P2-201ENST00000449477 176 ntBASIC3.88□□□□□ -1.79
CD40P25942 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 MIR2053-201ENST00000459295 91 ntBASIC3.88□□□□□ -1.79
CD40P25942 AL591473.1-201ENST00000464297 313 ntBASIC3.88□□□□□ -1.79
CD40P25942 RPS4XP13-201ENST00000483219 789 ntBASIC3.88□□□□□ -1.79
CD40P25942 AC018437.1-201ENST00000492214 406 ntBASIC3.88□□□□□ -1.79
CD40P25942 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CD40P25942 ZNF192P1-203ENST00000565888 810 ntBASIC3.88□□□□□ -1.79
CD40P25942 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.88□□□□□ -1.79
CD40P25942 AL354984.3-201ENST00000604803 325 ntBASIC3.88□□□□□ -1.79
CD40P25942 RNU6-6P-201ENST00000606623 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms