Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RNU6-393P-201ENST00000384475 107 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 MIR578-201ENST00000384828 96 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TNFSF4P23510 SNORA40C-201ENST00000391285 128 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AL583835.1-201ENST00000399570 407 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 RPL21P90-201ENST00000415692 466 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AL353729.1-201ENST00000425044 720 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFSF4P23510 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.56□□□□□ -1.84
TNFSF4P23510 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AC128713.1-201ENST00000471495 306 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 RN7SL604P-201ENST00000492589 296 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AC022493.1-201ENST00000492984 337 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 RPL29P14-201ENST00000495837 428 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AF213884.2-201ENST00000510417 903 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 SNORA31.19-201ENST00000517079 126 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.56□□□□□ -1.84
TNFSF4P23510 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.56□□□□□ -1.84
TNFSF4P23510 H3F3AP1-201ENST00000559984 334 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AC092325.1-201ENST00000566449 554 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AL161629.2-201ENST00000615347 275 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AP005264.7-201ENST00000625003 745 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AC008013.2-202ENST00000637965 364 ntBASIC3.56□□□□□ -1.84
TNFSF4P23510 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TNFSF4P23510 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TNFSF4P23510 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TNFSF4P23510 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TNFSF4P23510 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF4P23510 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF4P23510 U1.1-201ENST00000384101 164 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 RNU6-45P-201ENST00000384471 107 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 RNU6-1179P-201ENST00000384667 107 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TNFSF4P23510 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF4P23510 RN7SKP167-201ENST00000411047 285 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF4P23510 ARL5AP1-201ENST00000418991 388 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 SKA2P1-201ENST00000425592 390 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AL078601.1-201ENST00000444542 271 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 HSFY6P-201ENST00000445573 403 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AL360271.2-201ENST00000447710 161 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 RPS15AP27-201ENST00000449183 343 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 NDUFB1P2-201ENST00000449477 176 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AL031183.1-201ENST00000457667 207 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 RNA5SP246-201ENST00000458909 119 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 FAM133DP-201ENST00000464802 691 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AP002812.1-201ENST00000495378 474 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC009901.1-201ENST00000506703 541 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 MTCO3P9-201ENST00000506989 781 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC079140.5-201ENST00000507882 310 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC114786.4-201ENST00000508771 728 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFSF4P23510 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AC112206.3-201ENST00000514578 389 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 RNU6-572P-201ENST00000516724 80 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF4P23510 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFSF4P23510 CYP4A43P-201ENST00000568156 121 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AC022655.2-201ENST00000577280 318 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 MIR4782-201ENST00000577987 79 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 MIR3941-201ENST00000582572 103 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 MIR4697-201ENST00000582977 78 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AC020914.4-201ENST00000597690 277 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC002553.4-201ENST00000616896 331 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 AC233309.1-201ENST00000619522 751 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 U6.99-201ENST00000637524 83 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFSF4P23510 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
TNFSF4P23510 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
TNFSF4P23510 OR4G1P-203ENST00000641984 1631 ntBASIC3.55□□□□□ -1.84
TNFSF4P23510 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TNFSF4P23510 UBE3AP2-201ENST00000429033 2259 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF4P23510 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFSF4P23510 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TNFSF4P23510 RN7SKP227-201ENST00000364445 330 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 RNU4-66P-201ENST00000365199 138 ntBASIC3.54□□□□□ -1.84
TNFSF4P23510 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
TNFSF4P23510 Y_RNA.399-201ENST00000383955 105 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms