Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH3P22223 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH3P22223 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH3P22223 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 RNU5E-1-201ENST00000362477 120 ntBASIC3.07□□□□□ -1.92
CDH3P22223 RNY4P34-201ENST00000364779 95 ntBASIC3.07□□□□□ -1.92
CDH3P22223 RNU6-1119P-201ENST00000384349 108 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC110754.1-201ENST00000399740 601 ntBASIC3.07□□□□□ -1.92
CDH3P22223 RNA5SP229-201ENST00000410809 99 ntBASIC3.07□□□□□ -1.92
CDH3P22223 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC019097.1-201ENST00000424783 735 ntBASIC3.07□□□□□ -1.92
CDH3P22223 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL589823.1-201ENST00000429577 183 ntBASIC3.07□□□□□ -1.92
CDH3P22223 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH3P22223 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH3P22223 HMGB3P11-201ENST00000440127 604 ntBASIC3.07□□□□□ -1.92
CDH3P22223 MTCO2P7-201ENST00000446518 666 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL671855.1-201ENST00000446875 1203 ntBASIC3.07□□□□□ -1.92
CDH3P22223 MTND1P27-201ENST00000451117 902 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL031183.1-201ENST00000457667 207 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC008481.1-201ENST00000463278 396 ntBASIC3.07□□□□□ -1.92
CDH3P22223 RN7SL499P-201ENST00000481141 276 ntBASIC3.07□□□□□ -1.92
CDH3P22223 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH3P22223 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH3P22223 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
CDH3P22223 MTND3P5-201ENST00000512798 333 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH3P22223 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH3P22223 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH3P22223 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH3P22223 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH3P22223 MIR3913-1-201ENST00000577744 102 ntBASIC3.07□□□□□ -1.92
CDH3P22223 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
CDH3P22223 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH3P22223 AP000860.1-201ENST00000605250 559 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL627309.6-201ENST00000606857 840 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC098614.4-201ENST00000607601 462 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC006566.1-201ENST00000608943 513 ntBASIC3.07□□□□□ -1.92
CDH3P22223 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AL162274.2-201ENST00000614406 332 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC018692.3-201ENST00000623929 123 ntBASIC3.07□□□□□ -1.92
CDH3P22223 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 MIR4275-201ENST00000636486 87 ntBASIC3.07□□□□□ -1.92
CDH3P22223 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH3P22223 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 AC138915.1-201ENST00000565427 1685 ntBASIC3.07□□□□□ -1.92
CDH3P22223 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH3P22223 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CDH3P22223 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH3P22223 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH3P22223 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH3P22223 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDH3P22223 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH3P22223 RNU5A-1-201ENST00000362698 116 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RNU4-75P-201ENST00000364621 146 ntBASIC3.06□□□□□ -1.92
CDH3P22223 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH3P22223 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RNU6-195P-201ENST00000411352 109 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RPL21P24-201ENST00000413752 448 ntBASIC3.06□□□□□ -1.92
CDH3P22223 ELOCP17-201ENST00000414751 326 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RPS15AP12-201ENST00000419498 388 ntBASIC3.06□□□□□ -1.92
CDH3P22223 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC007283.2-201ENST00000424739 197 ntBASIC3.06□□□□□ -1.92
CDH3P22223 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH3P22223 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH3P22223 Z96811.1-201ENST00000445880 108 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
CDH3P22223 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH3P22223 TPTE2P5-203ENST00000458118 728 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC006445.1-201ENST00000491925 405 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC010587.1-201ENST00000505809 469 ntBASIC3.06□□□□□ -1.92
CDH3P22223 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH3P22223 AC114797.1-201ENST00000514003 728 ntBASIC3.06□□□□□ -1.92
CDH3P22223 SNORA18.6-201ENST00000516792 115 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RNA5SP337-201ENST00000517007 109 ntBASIC3.06□□□□□ -1.92
CDH3P22223 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
CDH3P22223 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH3P22223 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH3P22223 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH3P22223 AC137800.2-201ENST00000574375 120 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AF038458.1-201ENST00000588406 262 ntBASIC3.06□□□□□ -1.92
CDH3P22223 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH3P22223 AL160281.1-201ENST00000605307 311 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC103591.3-201ENST00000608684 209 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC103710.2-201ENST00000609912 942 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC069234.5-201ENST00000611056 416 ntBASIC3.06□□□□□ -1.92
CDH3P22223 AC091903.1-201ENST00000624322 454 ntBASIC3.06□□□□□ -1.92
CDH3P22223 PISRT1-201ENST00000626175 531 ntBASIC3.06□□□□□ -1.92
CDH3P22223 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH3P22223 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH3P22223 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH3P22223 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH3P22223 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms