Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 RPS4XP5-202ENST00000449995 1334 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ERCC3P19447 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC006971.1-201ENST00000407916 4486 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 SPRR2C-201ENST00000290702 219 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 RN7SKP280-201ENST00000364196 304 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 MIR548K-201ENST00000408406 116 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.06□□□□□ -1.6
ERCC3P19447 MTCO2P27-201ENST00000420740 428 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 Z74021.1-201ENST00000423610 407 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC007560.1-201ENST00000426912 237 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 TOMM20P4-201ENST00000427861 435 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AL512844.2-201ENST00000433990 593 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC007677.1-201ENST00000445757 515 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC3P19447 FABP5P15-201ENST00000453566 214 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC022493.1-201ENST00000492984 337 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC079140.5-201ENST00000507882 310 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC3P19447 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC3P19447 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC023043.2-201ENST00000589678 1026 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC004805.2-201ENST00000605382 482 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 RNU6-85P-201ENST00000605989 107 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC084781.2-201ENST00000615568 161 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC007742.2-201ENST00000618226 398 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 AC005086.4-201ENST00000623065 213 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.06□□□□□ -1.6
ERCC3P19447 AC099654.10-201ENST00000640395 161 ntBASIC5.06□□□□□ -1.6
ERCC3P19447 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.06□□□□□ -1.6
ERCC3P19447 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
ERCC3P19447 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.06□□□□□ -1.6
ERCC3P19447 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.06□□□□□ -1.6
ERCC3P19447 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERCC3P19447 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC3P19447 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC3P19447 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC3P19447 AL672296.1-201ENST00000427780 2158 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC3P19447 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.05□□□□□ -1.6
ERCC3P19447 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.05□□□□□ -1.6
ERCC3P19447 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC3P19447 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERCC3P19447 RNU2-68P-201ENST00000410878 191 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 HMGB1P9-201ENST00000429856 646 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 SNAP23P1-201ENST00000433229 246 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AL132765.1-201ENST00000434165 553 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC3P19447 NDUFB4P6-201ENST00000436819 366 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 Z82210.1-201ENST00000440037 231 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 RPS26P2-201ENST00000440331 348 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 RPL32P28-201ENST00000443577 397 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AC139453.3-201ENST00000493276 369 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 RN7SL691P-201ENST00000494487 301 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC3P19447 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
ERCC3P19447 AC008958.1-201ENST00000511047 682 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 RNA5SP73-201ENST00000516744 108 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 SNORA25.17-201ENST00000517184 124 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AC025755.1-201ENST00000521306 278 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AP003122.3-201ENST00000526316 255 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AC084851.1-201ENST00000529105 249 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AC026371.1-201ENST00000551867 419 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 ZNF192P1-203ENST00000565888 810 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AC034105.4-201ENST00000568304 277 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AL133215.3-201ENST00000609801 448 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 AL138726.1-201ENST00000614873 333 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 FAM157A-202ENST00000615155 405 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 MIR8059-201ENST00000620427 81 ntBASIC5.05□□□□□ -1.6
ERCC3P19447 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.05□□□□□ -1.6
ERCC3P19447 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.05□□□□□ -1.6
ERCC3P19447 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ERCC3P19447 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
ERCC3P19447 AF117829.1-206ENST00000621883 3802 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC3P19447 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC3P19447 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.04□□□□□ -1.6
ERCC3P19447 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ERCC3P19447 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC3P19447 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.04□□□□□ -1.6
ERCC3P19447 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ERCC3P19447 RNU4-14P-201ENST00000410858 122 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 RNU6-370P-201ENST00000411008 104 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 AC016831.2-201ENST00000417179 352 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 RPS15AP6-201ENST00000420703 385 ntBASIC5.04□□□□□ -1.6
ERCC3P19447 TMEM167AP1-201ENST00000423409 219 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms