Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 PHKBP1-201ENST00000450951 1951 ntBASIC5.04□□□□□ -1.6
HOXD8P13378 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXD8P13378 AL136164.3-201ENST00000624429 3978 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXD8P13378 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXD8P13378 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXD8P13378 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXD8P13378 AC133552.1-201ENST00000569988 4007 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AL157777.2-201ENST00000258070 137 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXD8P13378 RNU4-44P-201ENST00000363050 141 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 RNU6-1249P-201ENST00000363237 111 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 Y_RNA.324-201ENST00000365165 102 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
HOXD8P13378 UBBP2-201ENST00000376781 231 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 Y_RNA.555-201ENST00000384673 110 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 MIR521-1-201ENST00000384902 87 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 RNU6-712P-201ENST00000410558 100 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 RNU2-71P-201ENST00000411395 189 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AC096920.1-201ENST00000423991 241 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AC133134.1-201ENST00000466800 359 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 RPL23AP2-201ENST00000471227 466 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXD8P13378 AC020890.1-201ENST00000491837 504 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXD8P13378 AC008489.1-201ENST00000524271 483 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXD8P13378 LRRC37A5P-203ENST00000580181 585 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AL121917.1-203ENST00000605534 577 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 AL023881.1-201ENST00000621088 301 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXD8P13378 AL731532.2-201ENST00000623542 1953 ntBASIC5.03□□□□□ -1.6
HOXD8P13378 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXD8P13378 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXD8P13378 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXD8P13378 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 Y_RNA.54-201ENST00000362766 105 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 RNA5SP366-201ENST00000365454 123 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 RNU6-338P-201ENST00000383888 105 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXD8P13378 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXD8P13378 RPL7P5-201ENST00000471472 736 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXD8P13378 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXD8P13378 RNU6-143P-201ENST00000516942 93 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 RN7SKP234-201ENST00000517173 224 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 FTH1P11-201ENST00000517577 551 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 AP003730.1-201ENST00000524605 285 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 CYCSP29-201ENST00000533731 318 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HOXD8P13378 AC025884.1-201ENST00000556034 378 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXD8P13378 CPDP1-201ENST00000579660 283 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 BDH2P1-201ENST00000602288 736 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 BPIFA4P-203ENST00000603168 689 ntBASIC5.02□□□□□ -1.61
HOXD8P13378 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HOXD8P13378 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXD8P13378 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXD8P13378 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXD8P13378 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXD8P13378 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXD8P13378 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD8P13378 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 RNU1-76P-201ENST00000362903 159 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 RNU6-280P-201ENST00000364145 104 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 Y_RNA.785-201ENST00000384290 109 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 SNORA70C-201ENST00000384538 135 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 RNU6-607P-201ENST00000411283 108 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 EI24P1-201ENST00000416584 867 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 RPL21P38-201ENST00000418090 167 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 UBE2D3P2-201ENST00000424409 445 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXD8P13378 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD8P13378 NDUFB4P9-201ENST00000511646 388 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 Y_RNA.700-201ENST00000516806 100 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 AC034114.1-201ENST00000520293 285 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 TRAV8-5-201ENST00000537369 341 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD8P13378 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD8P13378 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 MIR3653-201ENST00000625572 110 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD8P13378 ZNF299P-201ENST00000406845 1804 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD8P13378 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD8P13378 MUC2-202ENST00000613187 4845 ntBASIC5.01□□□□□ -1.61
HOXD8P13378 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD8P13378 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HOXD8P13378 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD8P13378 Z95331.1-201ENST00000623075 23112 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms