Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CCNG1P1-201ENST00000406783 885 ntBASIC2.18□□□□□ -2.06
TPM1P09493 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.18□□□□□ -2.06
TPM1P09493 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM1P09493 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM1P09493 AL160314.1-201ENST00000490836 438 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC026801.1-201ENST00000497178 464 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC104090.1-201ENST00000506341 1171 ntBASIC2.18□□□□□ -2.06
TPM1P09493 SLC25A15P5-201ENST00000508033 253 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM1P09493 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.18□□□□□ -2.06
TPM1P09493 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM1P09493 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.18□□□□□ -2.06
TPM1P09493 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.18□□□□□ -2.06
TPM1P09493 NACAP3-201ENST00000552100 481 ntBASIC2.18□□□□□ -2.06
TPM1P09493 CYCSP2-201ENST00000558168 301 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC009097.3-201ENST00000563557 1018 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AL357094.1-201ENST00000603845 844 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC005332.6-201ENST00000613178 446 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC104763.3-201ENST00000613765 618 ntBASIC2.18□□□□□ -2.06
TPM1P09493 MIR3199-2-201ENST00000636243 86 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AL136360.1-201ENST00000503377 1900 ntBASIC2.18□□□□□ -2.06
TPM1P09493 AC006020.1-201ENST00000420179 1854 ntBASIC2.18□□□□□ -2.06
TPM1P09493 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 RNU6-1078P-201ENST00000364522 103 ntBASIC2.17□□□□□ -2.06
TPM1P09493 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TPM1P09493 ZNF90P2-204ENST00000419323 1075 ntBASIC2.17□□□□□ -2.06
TPM1P09493 HMGN2P19-201ENST00000425149 265 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 HMGB1P36-201ENST00000487709 576 ntBASIC2.17□□□□□ -2.06
TPM1P09493 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.17□□□□□ -2.06
TPM1P09493 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TPM1P09493 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.17□□□□□ -2.06
TPM1P09493 AF213884.2-201ENST00000510417 903 ntBASIC2.17□□□□□ -2.06
TPM1P09493 RN7SKP31-201ENST00000516354 278 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.17□□□□□ -2.06
TPM1P09493 AL049838.1-201ENST00000563647 981 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC106782.4-201ENST00000568264 210 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC078899.2-201ENST00000595282 212 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC068276.1-201ENST00000605793 379 ntBASIC2.17□□□□□ -2.06
TPM1P09493 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
TPM1P09493 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TPM1P09493 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TPM1P09493 MTND5P6-201ENST00000422338 1798 ntBASIC2.16□□□□□ -2.06
TPM1P09493 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.16□□□□□ -2.06
TPM1P09493 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TPM1P09493 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
TPM1P09493 RNU6-354P-201ENST00000383862 107 ntBASIC2.16□□□□□ -2.06
TPM1P09493 RNU6-610P-201ENST00000384264 107 ntBASIC2.16□□□□□ -2.06
TPM1P09493 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TPM1P09493 SNORD65.1-201ENST00000390889 71 ntBASIC2.16□□□□□ -2.06
TPM1P09493 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.16□□□□□ -2.06
TPM1P09493 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
TPM1P09493 SKA2P1-201ENST00000425592 390 ntBASIC2.16□□□□□ -2.06
TPM1P09493 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM1P09493 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM1P09493 UBE2D3P1-201ENST00000436669 444 ntBASIC2.16□□□□□ -2.06
TPM1P09493 SNRPEP9-201ENST00000436794 238 ntBASIC2.16□□□□□ -2.06
TPM1P09493 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM1P09493 SNORD19.2-201ENST00000516978 73 ntBASIC2.16□□□□□ -2.06
TPM1P09493 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.16□□□□□ -2.06
TPM1P09493 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.16□□□□□ -2.06
TPM1P09493 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.16□□□□□ -2.06
TPM1P09493 MIR3200-201ENST00000580767 85 ntBASIC2.16□□□□□ -2.06
TPM1P09493 MIR4765-201ENST00000585007 77 ntBASIC2.16□□□□□ -2.06
TPM1P09493 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
TPM1P09493 U2.21-201ENST00000637295 81 ntBASIC2.16□□□□□ -2.06
TPM1P09493 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TPM1P09493 AC107982.1-201ENST00000507171 1300 ntBASIC2.16□□□□□ -2.06
TPM1P09493 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.06
TPM1P09493 RNU6-707P-201ENST00000364647 95 ntBASIC2.15□□□□□ -2.07
TPM1P09493 RNU6-359P-201ENST00000365466 108 ntBASIC2.15□□□□□ -2.07
TPM1P09493 SNORA70.4-201ENST00000365509 134 ntBASIC2.15□□□□□ -2.07
TPM1P09493 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.15□□□□□ -2.07
TPM1P09493 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 MTCYBP38-201ENST00000417160 1123 ntBASIC2.15□□□□□ -2.07
TPM1P09493 EIF1AXP1-201ENST00000419267 435 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AC006946.1-201ENST00000429106 328 ntBASIC2.15□□□□□ -2.07
TPM1P09493 GTF2IP7-202ENST00000436677 309 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.15□□□□□ -2.07
TPM1P09493 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 HMGN1P28-201ENST00000521340 364 ntBASIC2.15□□□□□ -2.07
TPM1P09493 IGKV3-31-201ENST00000523109 329 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AP003122.3-201ENST00000526316 255 ntBASIC2.15□□□□□ -2.07
TPM1P09493 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.15□□□□□ -2.07
TPM1P09493 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.15□□□□□ -2.07
TPM1P09493 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TPM1P09493 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
TPM1P09493 AC009063.1-201ENST00000563342 702 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.15□□□□□ -2.07
TPM1P09493 RPP40P2-201ENST00000603596 712 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.15□□□□□ -2.07
TPM1P09493 AC243773.3-201ENST00000613270 256 ntBASIC2.15□□□□□ -2.07
TPM1P09493 AC010133.1-201ENST00000615809 842 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms