Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB1P09429 MTND1P26-201ENST00000440488 538 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB1P09429 AC117522.1-201ENST00000509821 380 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 RN7SKP18-201ENST00000516005 275 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 SNORA31.6-201ENST00000516241 130 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 Vault.3-201ENST00000516676 95 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 SNORD19.2-201ENST00000516978 73 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGB1P09429 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.19□□□□□ -1.74
HMGB1P09429 ADI1P3-201ENST00000549509 470 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB1P09429 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
HMGB1P09429 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGB1P09429 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGB1P09429 CLIC4P2-201ENST00000601934 717 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC015871.2-201ENST00000603605 948 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC010591.1-201ENST00000603941 649 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 MIR7851-201ENST00000610611 160 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC022149.2-201ENST00000621061 203 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC024940.5-201ENST00000622889 474 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC019226.2-201ENST00000625973 424 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGB1P09429 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGB1P09429 AC007823.1-201ENST00000569932 1566 ntBASIC4.19□□□□□ -1.74
HMGB1P09429 AC093908.1-201ENST00000623125 8092 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB1P09429 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB1P09429 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB1P09429 ZNF285B-201ENST00000561698 1767 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGB1P09429 Y_RNA.33-201ENST00000362591 102 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 MIR558-201ENST00000384920 94 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 CYCSP19-201ENST00000411715 316 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 Z99755.1-201ENST00000414048 380 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB1P09429 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB1P09429 CYCSP4-201ENST00000429682 331 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB1P09429 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB1P09429 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB1P09429 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AP002453.2-201ENST00000533503 320 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AC007834.2-201ENST00000536310 343 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGB1P09429 AC106785.1-201ENST00000565935 262 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 MIR1273C-201ENST00000578669 77 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 AC091152.3-201ENST00000604227 325 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGB1P09429 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
HMGB1P09429 ASNSP3-201ENST00000451989 1306 ntBASIC4.18□□□□□ -1.74
HMGB1P09429 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB1P09429 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGB1P09429 MTND5P1-201ENST00000445440 1375 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 U3.4-201ENST00000363352 213 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 RNU6-1328P-201ENST00000410938 106 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 RNA5SP492-201ENST00000411330 114 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB1P09429 AC063979.1-201ENST00000415539 377 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB1P09429 AL158071.1-201ENST00000430315 461 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB1P09429 OR2B8P-201ENST00000432841 938 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 RPL21P2-201ENST00000440049 481 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AL357552.1-201ENST00000445254 415 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB1P09429 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB1P09429 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB1P09429 RPPH1-2P-201ENST00000516688 293 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGB1P09429 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGB1P09429 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.17□□□□□ -1.74
HMGB1P09429 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.17□□□□□ -1.74
HMGB1P09429 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.17□□□□□ -1.74
HMGB1P09429 LINC00933-203ENST00000559812 219 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 CYCSP39-201ENST00000565821 309 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB1P09429 AC135507.1-201ENST00000607214 561 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 AC126118.1-201ENST00000607744 628 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 RNVU1-4-201ENST00000612985 164 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB1P09429 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HMGB1P09429 AC080128.1-201ENST00000474389 1917 ntBASIC4.17□□□□□ -1.74
HMGB1P09429 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.17□□□□□ -1.74
HMGB1P09429 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB1P09429 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
HMGB1P09429 MTND5P27-201ENST00000428871 1720 ntBASIC4.16□□□□□ -1.74
HMGB1P09429 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB1P09429 RNU6-1280P-201ENST00000365211 107 ntBASIC4.16□□□□□ -1.74
HMGB1P09429 RNU6-898P-201ENST00000365627 104 ntBASIC4.16□□□□□ -1.74
HMGB1P09429 MIR218-1-201ENST00000384999 110 ntBASIC4.16□□□□□ -1.74
HMGB1P09429 RNU6ATAC-201ENST00000408749 126 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms