Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MIR16-1-201ENST00000385271 89 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
COL2A1P02458 AL034374.1-201ENST00000406329 351 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 LSM1P1-201ENST00000438629 273 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC093019.1-201ENST00000443135 252 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RPL39P6-201ENST00000448289 150 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 GAPDHP17-201ENST00000449858 1001 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.07□□□□□ -1.92
COL2A1P02458 AL590365.1-201ENST00000450788 243 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC022364.2-201ENST00000457963 554 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RPS27AP9-201ENST00000477681 438 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.07□□□□□ -1.92
COL2A1P02458 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 MTND3P22-201ENST00000510932 243 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC091133.4-201ENST00000511142 308 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 MTCO1P30-201ENST00000515244 580 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 RNU6-548P-201ENST00000517083 115 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AP001189.2-201ENST00000527320 189 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC013828.2-201ENST00000532487 235 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.07□□□□□ -1.92
COL2A1P02458 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 POLR2KP1-201ENST00000553226 168 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC012182.1-201ENST00000570133 895 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 MIR3186-201ENST00000577404 85 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 MIR4795-201ENST00000584182 89 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.07□□□□□ -1.92
COL2A1P02458 AC008752.3-201ENST00000588113 712 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.07□□□□□ -1.92
COL2A1P02458 YWHAQP7-201ENST00000603536 658 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC093788.1-201ENST00000609356 927 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 AC055764.2-201ENST00000610089 670 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 AC131902.3-201ENST00000611767 581 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 MIR3662-201ENST00000637030 95 ntBASIC3.07□□□□□ -1.92
COL2A1P02458 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL2A1P02458 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL2A1P02458 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
COL2A1P02458 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL2A1P02458 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.58-201ENST00000362807 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.97-201ENST00000363094 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.154-201ENST00000363624 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RNU4-76P-201ENST00000364509 141 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RNY3P1-201ENST00000365085 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RNY3-201ENST00000365484 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.419-201ENST00000384041 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.490-201ENST00000384413 102 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 MIR27B-201ENST00000385129 97 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AL512633.1-201ENST00000399931 655 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL2A1P02458 CIR1P3-201ENST00000405137 479 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 GSTA9P-201ENST00000406231 611 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 Y_RNA.598-201ENST00000410480 95 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RNU4-55P-201ENST00000410731 137 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 C1DP2-201ENST00000418167 426 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 USP9YP27-201ENST00000418455 438 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.06□□□□□ -1.92
COL2A1P02458 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.06□□□□□ -1.92
COL2A1P02458 MTCYBP45-201ENST00000435243 565 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RPL37P21-201ENST00000435890 276 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 MTND4LP16-201ENST00000440828 295 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.06□□□□□ -1.92
COL2A1P02458 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.06□□□□□ -1.92
COL2A1P02458 PMCHL2-203ENST00000457791 237 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AP000852.1-201ENST00000472460 573 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RBM43P1-201ENST00000476891 1081 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC019235.1-201ENST00000503847 207 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC111193.1-201ENST00000504097 155 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.06□□□□□ -1.92
COL2A1P02458 MTND5P4-201ENST00000514978 288 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 CENPUP1-201ENST00000526649 1202 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.06□□□□□ -1.92
COL2A1P02458 RPS3AP23-202ENST00000574601 686 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AP001004.1-201ENST00000582468 324 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC009977.1-201ENST00000586015 570 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC007621.1-201ENST00000604544 437 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC087045.1-201ENST00000605856 382 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.06□□□□□ -1.92
COL2A1P02458 FER-210ENST00000628534 558 ntTSL 5 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.06□□□□□ -1.92
COL2A1P02458 AC093311.1-201ENST00000506586 2021 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 AC093010.3-201ENST00000570269 15214 ntBASIC3.06□□□□□ -1.92
COL2A1P02458 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL2A1P02458 Y_RNA.4-201ENST00000362333 112 ntBASIC3.05□□□□□ -1.92
COL2A1P02458 RNU6-839P-201ENST00000363347 108 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms