Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL109809.4-201ENST00000603520 2185 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AC004656.1-201ENST00000568479 4951 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 SNORD78.2-201ENST00000391076 69 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 CYP4F29P-201ENST00000420685 446 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 AC079354.2-201ENST00000453523 154 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 RNU5F-8P-201ENST00000515941 111 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 SNORA31.3-201ENST00000516029 96 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 AP000859.1-201ENST00000525536 307 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 CASP1P1-201ENST00000526345 212 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 SNRPGP16-201ENST00000533275 226 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 MIR7853-201ENST00000584820 132 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AC074140.1-201ENST00000621617 208 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AL359955.1-201ENST00000455242 3275 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 AC008758.3-201ENST00000507003 1829 ntBASIC5.62□□□□□ -1.51
ALDH1A1P00352 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
ALDH1A1P00352 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ALDH1A1P00352 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC125336.1-201ENST00000508893 2827 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC093671.1-201ENST00000624981 2929 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 RN7SKP145-201ENST00000363291 303 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 RNA5SP28-201ENST00000363841 119 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 Y_RNA.286-201ENST00000364813 102 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 AL359837.1-201ENST00000381357 287 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 RNU6-257P-201ENST00000410238 98 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 RNU7-87P-201ENST00000459343 62 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 CR383656.7-201ENST00000548164 174 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC104581.2-201ENST00000572227 430 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 AL034351.1-201ENST00000605288 668 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 ZYXP1-201ENST00000617638 118 ntBASIC5.61□□□□□ -1.51
ALDH1A1P00352 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.61□□□□□ -1.51
ALDH1A1P00352 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ALDH1A1P00352 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNU5B-2P-201ENST00000363036 113 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 Y_RNA.215-201ENST00000364204 112 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNVU1-3-201ENST00000364313 161 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNU6-449P-201ENST00000383914 107 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 Y_RNA.623-201ENST00000411128 95 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 TMSB10P2-201ENST00000416049 131 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RPS15AP40-201ENST00000419621 391 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC234775.1-201ENST00000454247 670 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC091179.1-201ENST00000461606 579 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC034236.1-201ENST00000469891 373 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNU1-6P-201ENST00000516290 144 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNU6-426P-201ENST00000516464 97 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 RNA5SP392-201ENST00000516905 112 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 NDUFB4P11-201ENST00000560510 395 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 RPL23AP87-202ENST00000573039 466 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 MIR548AC-201ENST00000585049 88 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AC037487.3-201ENST00000606668 112 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 AP005019.3-201ENST00000620418 560 ntBASIC5.6□□□□□ -1.51
ALDH1A1P00352 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ALDH1A1P00352 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ALDH1A1P00352 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms