Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 GLUD1P4-201ENST00000590914 418 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AL133393.1-201ENST00000603277 287 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AP003122.6-201ENST00000623831 495 ntBASIC3.57□□□□□ -1.84
DDX58O95786 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DDX58O95786 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX58O95786 AC110774.1-201ENST00000623567 2018 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
DDX58O95786 CD24P4-201ENST00000382840 243 ntBASIC3.56□□□□□ -1.84
DDX58O95786 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
DDX58O95786 MIR1302-8-201ENST00000408342 128 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX58O95786 AL353777.1-201ENST00000425552 326 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 DDX3P2-201ENST00000446138 111 ntBASIC3.56□□□□□ -1.84
DDX58O95786 SNRPGP9-201ENST00000456025 225 ntBASIC3.56□□□□□ -1.84
DDX58O95786 RPS27P29-201ENST00000463110 252 ntBASIC3.56□□□□□ -1.84
DDX58O95786 RPS20P22-201ENST00000473700 357 ntBASIC3.56□□□□□ -1.84
DDX58O95786 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX58O95786 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AC022616.6-201ENST00000520479 119 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AC060788.1-201ENST00000521318 469 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX58O95786 AC100870.1-201ENST00000522035 505 ntBASIC3.56□□□□□ -1.84
DDX58O95786 DNAJC8P1-201ENST00000554535 372 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX58O95786 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX58O95786 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX58O95786 AC010620.1-201ENST00000601088 1102 ntBASIC3.56□□□□□ -1.84
DDX58O95786 AC090115.4-201ENST00000609970 188 ntBASIC3.56□□□□□ -1.84
DDX58O95786 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX58O95786 AC007998.5-201ENST00000622938 237 ntBASIC3.56□□□□□ -1.84
DDX58O95786 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX58O95786 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX58O95786 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX58O95786 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX58O95786 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
DDX58O95786 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX58O95786 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
DDX58O95786 RNU4-21P-201ENST00000362802 126 ntBASIC3.55□□□□□ -1.84
DDX58O95786 U3.4-201ENST00000363352 213 ntBASIC3.55□□□□□ -1.84
DDX58O95786 RNY3P13-201ENST00000365542 102 ntBASIC3.55□□□□□ -1.84
DDX58O95786 Y_RNA.500-201ENST00000384466 111 ntBASIC3.55□□□□□ -1.84
DDX58O95786 RNU6-1035P-201ENST00000384477 107 ntBASIC3.55□□□□□ -1.84
DDX58O95786 RNY3P10-201ENST00000384764 102 ntBASIC3.55□□□□□ -1.84
DDX58O95786 MRPL42P2-201ENST00000403169 426 ntBASIC3.55□□□□□ -1.84
DDX58O95786 Y_RNA.608-201ENST00000410647 95 ntBASIC3.55□□□□□ -1.84
DDX58O95786 USP9YP13-201ENST00000417797 480 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX58O95786 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 AC244035.1-201ENST00000430042 390 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.55□□□□□ -1.84
DDX58O95786 ARPC3P1-201ENST00000437218 533 ntBASIC3.55□□□□□ -1.84
DDX58O95786 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 SSXP1-201ENST00000453640 473 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 RPL21P41-201ENST00000459863 264 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AL160314.1-201ENST00000490836 438 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC091965.2-201ENST00000512324 613 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
DDX58O95786 AC079600.2-201ENST00000550076 130 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX58O95786 AL157394.1-201ENST00000562983 1224 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 Z94722.1-201ENST00000604328 474 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC068276.1-201ENST00000605793 379 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AC239868.4-201ENST00000608318 671 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AL391813.2-201ENST00000609113 322 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 AC104010.1-201ENST00000616889 150 ntBASIC3.55□□□□□ -1.84
DDX58O95786 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX58O95786 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
DDX58O95786 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX58O95786 AC092593.1-201ENST00000515413 1815 ntBASIC3.54□□□□□ -1.84
DDX58O95786 RNU6-1027P-201ENST00000383998 107 ntBASIC3.54□□□□□ -1.84
DDX58O95786 RNU6-198P-201ENST00000384258 104 ntBASIC3.54□□□□□ -1.84
DDX58O95786 SAR1AP2-201ENST00000392696 594 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AL138827.1-201ENST00000402666 306 ntBASIC3.54□□□□□ -1.84
DDX58O95786 Y_RNA.598-201ENST00000410480 95 ntBASIC3.54□□□□□ -1.84
DDX58O95786 HMGB1P27-201ENST00000431429 603 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX58O95786 AC129850.1-201ENST00000436203 508 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AL513043.1-201ENST00000439124 535 ntBASIC3.54□□□□□ -1.84
DDX58O95786 MTND2P22-201ENST00000444325 1033 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AC009961.3-201ENST00000449832 765 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX58O95786 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX58O95786 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX58O95786 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
DDX58O95786 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms