Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU7-23P-201ENST00000459465 62 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AC128713.1-201ENST00000471495 306 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC114781.4-201ENST00000513707 639 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 RNU6-1282P-201ENST00000516735 96 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 RNU6-840P-201ENST00000517275 65 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AP000889.1-201ENST00000530968 660 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC009097.3-201ENST00000563557 1018 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA3DO95025 MIR4513-201ENST00000581077 86 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AC091057.3-201ENST00000602684 733 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AC025594.3-201ENST00000613068 790 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AC010608.3-201ENST00000625048 527 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AL159972.1-201ENST00000625150 448 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC243829.7-201ENST00000633081 225 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SEMA3DO95025 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SEMA3DO95025 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SEMA3DO95025 RNU4-68P-201ENST00000364314 141 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 VN1R51P-201ENST00000411675 945 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA3DO95025 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AC018634.1-201ENST00000437554 401 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 COX7BP2-201ENST00000437976 242 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 CBWD4P-201ENST00000445695 655 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.18□□□□□ -2.06
SEMA3DO95025 WASF1P1-201ENST00000447560 1131 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AL031313.1-201ENST00000448435 256 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AC104563.1-201ENST00000476147 376 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC134050.1-201ENST00000495088 933 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 GTF2IP9-201ENST00000502460 301 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC022447.3-201ENST00000506865 495 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC024589.1-201ENST00000512207 263 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC087276.1-201ENST00000529659 480 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA3DO95025 MIR4509-3-201ENST00000578671 94 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 SNORD53-201ENST00000579969 78 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 MIR4509-2-201ENST00000583920 94 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA3DO95025 AL139344.1-201ENST00000605228 195 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC135507.1-201ENST00000607214 561 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 MIR4509-1-201ENST00000618224 94 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC099654.9-201ENST00000637055 678 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 AC099063.3-201ENST00000642066 185 ntBASIC2.18□□□□□ -2.06
SEMA3DO95025 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SEMA3DO95025 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.18□□□□□ -2.06
SEMA3DO95025 RNU6-920P-201ENST00000410926 92 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 RNU6-516P-201ENST00000411381 104 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 TPMTP3-201ENST00000411928 735 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AC107081.1-201ENST00000414975 361 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AC007919.1-201ENST00000429380 217 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 BNIP3P2-201ENST00000441221 577 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 PIGFP3-201ENST00000441918 722 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 BMI1P1-201ENST00000445879 941 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 DPPA3P1-201ENST00000448050 469 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
SEMA3DO95025 RPS20P20-201ENST00000460498 340 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.17□□□□□ -2.06
SEMA3DO95025 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.17□□□□□ -2.06
SEMA3DO95025 MRPS36P2-201ENST00000512569 299 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.17□□□□□ -2.06
SEMA3DO95025 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.17□□□□□ -2.06
SEMA3DO95025 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.17□□□□□ -2.06
SEMA3DO95025 CYCSP26-201ENST00000534107 320 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 MIR4672-201ENST00000583126 81 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AC090186.1-201ENST00000605991 572 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 RNU4-5P-201ENST00000607255 135 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
SEMA3DO95025 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.17□□□□□ -2.06
SEMA3DO95025 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SEMA3DO95025 AC009090.3-201ENST00000616553 565 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AC019226.1-201ENST00000625666 515 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 AL138713.1-201ENST00000624026 2130 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 CKAP2P1-201ENST00000555477 2049 ntBASIC2.17□□□□□ -2.06
SEMA3DO95025 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
SEMA3DO95025 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
SEMA3DO95025 DDX43P2-201ENST00000604753 1354 ntBASIC2.16□□□□□ -2.06
SEMA3DO95025 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SEMA3DO95025 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms