Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SNORA57.3-201ENST00000411095 141 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 BX323014.1-201ENST00000412876 237 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 RPL21P109-201ENST00000422213 475 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 CALM2P2-201ENST00000428512 440 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP4O75379 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP4O75379 RNU7-152P-201ENST00000458982 64 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 TRBVA-201ENST00000498804 316 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 VWA8P1-201ENST00000510889 176 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 RNU6-1038P-201ENST00000516516 104 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.79□□□□□ -1.64
VAMP4O75379 AC008011.1-201ENST00000545989 227 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.79□□□□□ -1.64
VAMP4O75379 AL360157.1-201ENST00000565962 87 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 MIR3942-201ENST00000585264 109 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP4O75379 AL020997.2-201ENST00000602607 184 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 SNRPGP17-201ENST00000603780 214 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 Z82243.1-201ENST00000609432 473 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 AL713922.2-201ENST00000619384 716 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.79□□□□□ -1.64
VAMP4O75379 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP4O75379 DDX10P1-201ENST00000448545 1933 ntBASIC4.79□□□□□ -1.64
VAMP4O75379 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.79□□□□□ -1.64
VAMP4O75379 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP4O75379 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VAMP4O75379 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP4O75379 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 RNU6-474P-201ENST00000384243 107 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 MIR606-201ENST00000384851 96 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 HMGN2P8-201ENST00000391458 268 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 AC092447.6-201ENST00000414578 210 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 UBE2FP1-201ENST00000416536 447 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 SYF2P2-201ENST00000417620 583 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 RAC1P6-201ENST00000423911 575 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 NDUFB1P1-201ENST00000435191 180 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC234775.1-201ENST00000454247 670 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC027575.1-201ENST00000481064 460 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP4O75379 HMGB3P15-201ENST00000507326 574 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 Y_RNA.682-201ENST00000516457 100 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 RNU6-1088P-201ENST00000516850 104 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 AC090136.1-201ENST00000520009 240 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 OR11H5P-201ENST00000554039 926 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AL121576.1-201ENST00000556055 276 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.78□□□□□ -1.64
VAMP4O75379 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.78□□□□□ -1.64
VAMP4O75379 AC006504.6-201ENST00000590142 199 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 APOOP1-201ENST00000604695 592 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC245389.1-201ENST00000605141 529 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 AC116312.1-201ENST00000606841 314 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 TUG1_2.1-201ENST00000614234 87 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 AC012442.3-202ENST00000636742 206 ntBASIC4.78□□□□□ -1.64
VAMP4O75379 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
VAMP4O75379 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VAMP4O75379 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.78□□□□□ -1.64
VAMP4O75379 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VAMP4O75379 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.77□□□□□ -1.65
VAMP4O75379 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 Y_RNA.132-201ENST00000363421 102 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 RNA5SP51-201ENST00000364750 119 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 SNORA73.2-201ENST00000364946 201 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 SNORA70E-201ENST00000384492 135 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 RPL5P18-201ENST00000406671 891 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC074085.1-201ENST00000413598 418 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.77□□□□□ -1.65
VAMP4O75379 AC007389.2-201ENST00000434630 306 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VAMP4O75379 AC020550.1-201ENST00000447385 163 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AL162389.1-201ENST00000449233 177 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC107399.1-201ENST00000451226 265 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 Y_RNA.631-201ENST00000459607 101 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC130509.1-201ENST00000464158 433 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 VN1R17P-201ENST00000472048 1090 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC108078.2-201ENST00000510750 236 ntBASIC4.77□□□□□ -1.65
VAMP4O75379 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms